Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01078 ATGCGTGAAACCCATCACTTATTAAATAACGTTGTAGCAACAAAAACAGAACATCATCAACACTGCAACCCCCATCTGAAAACCCATCACCAACCTTTCCCTCATCACACTTGGAAGAAGATGGGTTCAAAATCAGTGACTTTAACCTTTGAGGATGTGGCTAAGCATAATCAGAAAAAGGATTGTTGGATCATAGTCAACAAAAAGGTATACGATGTTACTCCATTTTTGGATGATCATCCAGGAGGTGATGAGGCTTTACTGTCTGCTACAGGGAAGGATGCGACCTTGGATTTCGAAGATGTCGGCCACAGTGACTCGGCAACAGAGATGATGGAACAGTACTTTGTTGGGGAGGTTGACACCGCAACACTCCCAGCAGAAGCTAGGAACAATCAACCTCCACCAATTCAAACAACTACCTTAAGCAATGAATCTTCTGGATTTCTCTTTAAGTTCTTGCAGTACTTGGTGCCATTGCTGATATTGGGCTCTGCATTTGCTCTGCAGTACTATGGGAAGAAAAGCAAGACCAATGAATCATAA 546 0.4267 MRETHHLLNNVVATKTEHHQHCNPHLKTHHQPFPHHTWKKMGSKSVTLTFEDVAKHNQKKDCWIIVNKKVYDVTPFLDDHPGGDEALLSATGKDATLDFEDVGHSDSATEMMEQYFVGEVDTATLPAEARNNQPPPIQTTTLSNESSGFLFKFLQYLVPLLILGSAFALQYYGKKSKTNES 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01078 181 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 76 83 IPR018506 GO:0020037
Vifa4g01078 181 FunFam Cytochrome b5 type B 42 125 - -
Vifa4g01078 181 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 45 121 IPR001199 -
Vifa4g01078 181 PANTHER CYTOCHROME B5 40 174 - -
Vifa4g01078 181 PRINTS Cytochrome B5 signature 80 94 IPR001199 -
Vifa4g01078 181 PRINTS Cytochrome B5 signature 95 102 IPR001199 -
Vifa4g01078 181 PRINTS Cytochrome B5 signature 70 80 IPR001199 -
Vifa4g01078 181 PRINTS Cytochrome B5 signature 108 120 IPR001199 -
Vifa4g01078 181 SMART Cyt_b5_2 48 121 IPR001199 -
Vifa4g01078 181 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 43 126 IPR036400 -
Vifa4g01078 181 Gene3D - 38 125 IPR036400 -
Vifa4g01078 181 Pfam Cytochrome b5-like Heme/Steroid binding domain 49 120 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01078 Vifa-Chr4 311793675 311798719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01078 41 175 NADPH P450 reductases AT5G53560 55.556 1.99e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01078 K23490 - gmx:100500069 206.838