Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01054 ATGACGCAACCCCTTACATCACAAACCCAATCTTCAAACCACCCTCTACTCTCCGTAAGCAATACTCCCTCTCCGGCTAGTACCAGGCTACTCCCTCCTGTTAACGCCCTTCCAATACTCACTGCAAACTCCCTCTATTCTGTCAATTCCTTACTCCCACCATTGATTGTCCTCCACTTCACTCATCCTCTGTTCACTCACCTTGAGCAACAACCTCTATCAACTCCGCTAACTCACGTTCAGAACCCTAATCCTAAACCAAACAACAAATCTAGTTCACTCGGCGAACTCGACAAATTCTCTGGTCTTCGCATAAGGGACCAATGTTTAACACCAGCTGAGCTTAGGGAACAACTTCAAGACATTCATTTTGTTCGCCTACCCGTCATCAAGAATTTGGTGAATGGGGATACTTTCTCTGGAAATTGGGTAACTATTGGAGTGTTGACTGAGAAGGGAATTCAGAAAACAAGTTCAAATGGGAAGAGCTTTTGCATATGGAAAATTGGGTGTTTGGATGAAAATACTGTTCCTCTTTTCTTGTTTGGAAATGCTTATCAGAGGAATTGCCAAGAGAAGGCAGGAACGGTCTTTGCACTCTTTAATTGTGGTGTTCGCAAGGATGCCAAGGCTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTGTGAAGATGGGCACCTCTGTGGATTACGGAGTTTGTAAAGCGAAAAGAGCGGATGGGGTGGCATGTACAATGGCTATAACTAGGCGTCAGGGGACTTATTGTAAATATTATAAATCAAACACCATCCGTGAAGCTCATCACCTCCTTCAACAACTTCAGCAACTCACCTTCATCCGCCTTTCTCCGCAAATCAGAACACTTTCCATCGCCCATCTTGGTACTTCCTCCGTCTATATTTTGTGA 915 0.4393 MTQPLTSQTQSSNHPLLSVSNTPSPASTRLLPPVNALPILTANSLYSVNSLLPPLIVLHFTHPLFTHLEQQPLSTPLTHVQNPNPKPNNKSSSLGELDKFSGLRIRDQCLTPAELREQLQDIHFVRLPVIKNLVNGDTFSGNWVTIGVLTEKGIQKTSSNGKSFCIWKIGCLDENTVPLFLFGNAYQRNCQEKAGTVFALFNCGVRKDAKANGFSLSIYSPNQIVKMGTSVDYGVCKAKRADGVACTMAITRRQGTYCKYYKSNTIREAHHLLQQLQQLTFIRLSPQIRTLSIAHLGTSSVYIL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01054 304 Gene3D - 88 261 IPR012340 -
Vifa4g01054 304 PANTHER PROTEIN MCM10 HOMOLOG 89 268 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vifa4g01054 304 MobiDBLite consensus disorder prediction 1 25 - -
Vifa4g01054 304 FunFam DNA replication licensing factor mcm10 89 262 - -
Vifa4g01054 304 MobiDBLite consensus disorder prediction 75 95 - -
Vifa4g01054 304 Pfam Primase zinc finger 228 268 IPR015408 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01054 Vifa-Chr4 306838933 306840593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01054 80 264 Core DNA Replication Machinery Family AT2G20980 57.297 4.85e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01054 K10736 - gmx:100527758 264.233