Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01053 ATGACGCAACCCCTTACATCACAAACCCAATCTTCAAACCACCCTCTACTCTCCGTAAGCAATACTCCCTCTCCGGCTAGTACCAGGCTACTCCCTCCTGTTAACGCCCTTCCAATACTCACTGCAAACTCCCTCTATTCTGTCAATTCCTTACTCCCACCATTGATTGTCCTCCACTTTACTCATCCTCTGTTCACTCACCTTGAGCAACAACCTCTATCAACTCCGCTAACTCACGTTCAGAACCCTAATCCTAAACCAAACAACAAATCTAGTTCACTCGGCGAACTCGACAAATTCTCTGGTCTTCGCATAAGGGACCAATGTTTAACACCAGCTGAGCTTAGGGAACAACTTCAAGACATTCGTTTTGTTCGTATACCCGTCATCAAGAATTTGGTGAATGGGGATACTTTCTCTGGAAATTGGGTAACTATTGGAGTGTTGACTGATAAGGGAATTCAGAAAACAAGTTCAAATGGGAAGAGCTTTTTCATATGGAAAATTGGGTGTTTGGATGAAAATACTGTTCCTCTTTTCTTGTTTGGAAATGCTTATCAGAGGAATTGCCAAGAGAAGGCAGGAACGGTCTTTGCACTCTTTAATTGTGGTGTTCGCAAGGATGCCAAGGCTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTGTGAAGATGGGCACCTCTGTGGATTACGGAGTTTGTAAAGCGAAAAGAGCGGATGGGGTGGCATGTACAATGGCTATAACTAGGCGTCAGGGGACTTATTGTAAATATTATAAATCAAACACCATCCGTGAAGCTCATCACCTCCTTCAACAACTTCAGCAACTCAACTTCATCCGCCTTTCTCCGCAAATCAGAACACTTTCCATCGCCCATCTTGGTACTTCCTCCGTCTATATTTTGTGA 915 0.4339 MTQPLTSQTQSSNHPLLSVSNTPSPASTRLLPPVNALPILTANSLYSVNSLLPPLIVLHFTHPLFTHLEQQPLSTPLTHVQNPNPKPNNKSSSLGELDKFSGLRIRDQCLTPAELREQLQDIRFVRIPVIKNLVNGDTFSGNWVTIGVLTDKGIQKTSSNGKSFFIWKIGCLDENTVPLFLFGNAYQRNCQEKAGTVFALFNCGVRKDAKANGFSLSIYSPNQIVKMGTSVDYGVCKAKRADGVACTMAITRRQGTYCKYYKSNTIREAHHLLQQLQQLNFIRLSPQIRTLSIAHLGTSSVYIL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01053 304 PANTHER PROTEIN MCM10 HOMOLOG 89 268 IPR040184 GO:0003690|GO:0003697|GO:0006270
Vifa4g01053 304 MobiDBLite consensus disorder prediction 1 25 - -
Vifa4g01053 304 MobiDBLite consensus disorder prediction 75 95 - -
Vifa4g01053 304 Pfam Primase zinc finger 228 268 IPR015408 GO:0005634|GO:0006260
Vifa4g01053 304 Gene3D - 88 261 IPR012340 -
Vifa4g01053 304 FunFam DNA replication licensing factor mcm10 89 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01053 Vifa-Chr4 306828197 306829855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01053 80 281 Core DNA Replication Machinery Family AT2G20980 52.970 7.46e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01053 K10736 - zju:107427508 259.996