Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01014 ATGGAGGCCATCAATTCTACTGTTTTCACCCCCCTTTCCGTGCTATCTGATAGAACAAAAAAACCCACCAAAATTTCATGCAAAGTTTCAAACTTTTCCACTTCAAACACCAGAAAAAACAACCTAAAAGAGTTTCTATCAAAGGGTTTACAAAAGGGTCTAATCCTTGCAGCAACTTCAGTTGTGAATGTCAATGTAAACCATGGTGAATTTGCCAGAGCTTTAACATATGAAGAAGCATTAGGACTATCTCCAAGTGCTTCAAACTATGGTGGTGACATTGATGTCAATGGTTTTGTAGATAGTGTGGTAGGCTTTGTAACTGAAAATCCTGCAATTCTTGCTGGTGGAGTTGCTATTTTGGCAGTTCCATTGGTTTTGTCTCAGATTTTGAAGAAACCTAAGCCTTGGGGAGTTGAATCAGCTAAAAATGCTTATGCTAAGTTAGGGGCTGATGGGAATGCTCAGTTGCTTGATATAAGAGGTTTGGCTGAGATTAGGCAAATTGGTGGCCCAAATGTTGGGGGTTTGAAGAAGAAATCGGTGTCGATAGCTTATAAAGGTGATGATAAGCCAGGGTTTTTGAAGAAGCTTTCTTTGAAATTTAAGGACCCTGAGAATACTACATTGTTCATTCTTGACAAATTTGACGGGAACTCTGAACTGGTTGCAGAATTAGTCACCCTTAATGGATTTAAATCTGCTTATGCAATTAAGGATGGCGCAGAAGGACCACGGGGATGGGTGAATAGCGGTCTTCCTTGGATTGAACCAAAGAAAGCATTGAGCTTTAATTTTGGAAGCTTGACAGATACTATCAATGAAGCAATTGGAGAATCTGATGGCTTGGTTGTCACTCTTGGGATTGCTGCAGCTACGGGATTGGGTGCATTAGCTTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCTGCTGCAATTGTTCAGTTTGCAAGCAAGAAGCTTCTTTTTGCCGAGGACCGGAAGAAAACACTAAAACAAGTTGACGAGTTCTTGAACACCAAAGTTGCTCCTCAGGAGCTTGTTGATGAAATAAAGGACATCGGTAAGGCTCTTCTACCAACCTCCACCAACAGCGATAAGGCTCTTCCTGCACCAACAGAAACTGTTCCAGAGCTCCCTACAGTTACTGCCACCGCGCAGAAATCAGAAGTTACTCCCGATATTGTCGAGCCCGTACAGAAAGCAGAAGCTACTCCTGATATTGTTGAGACCGTACAGAAACCCGAAGCTACTCCTCCTGACGTTATCTCCGAGACCAAAGTAGAAGCAGCAGCAGAACCTGCTCCAGAAATAAACTCAGTCCCAAAAACTGAAACTGTGGCAGAATCAATTCCTGCGCAACCTAAACCGCTCTCACCATACCCATATTATCCAGATTTCAAACCTCCAACATCTCCATCTCCTACACAGCCCTAG 1443 0.4262 MEAINSTVFTPLSVLSDRTKKPTKISCKVSNFSTSNTRKNNLKEFLSKGLQKGLILAATSVVNVNVNHGEFARALTYEEALGLSPSASNYGGDIDVNGFVDSVVGFVTENPAILAGGVAILAVPLVLSQILKKPKPWGVESAKNAYAKLGADGNAQLLDIRGLAEIRQIGGPNVGGLKKKSVSIAYKGDDKPGFLKKLSLKFKDPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPRGWVNSGLPWIEPKKALSFNFGSLTDTINEAIGESDGLVVTLGIAAATGLGALAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVDEFLNTKVAPQELVDEIKDIGKALLPTSTNSDKALPAPTETVPELPTVTATAQKSEVTPDIVEPVQKAEATPDIVETVQKPEATPPDVISETKVEAAAEPAPEINSVPKTETVAESIPAQPKPLSPYPYYPDFKPPTSPSPTQP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01014 480 MobiDBLite consensus disorder prediction 419 480 - -
Vifa4g01014 480 MobiDBLite consensus disorder prediction 457 480 - -
Vifa4g01014 480 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 480 IPR044240 -
Vifa4g01014 480 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 137 257 IPR036873 -
Vifa4g01014 480 Gene3D - 137 267 IPR036873 -
Vifa4g01014 480 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 135 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01014 Vifa-Chr4 292842326 292845607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g01014 1 470 Sulfurtransferasese or Rhodanese AT4G01050 58.403 4.51e-151 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01014 K17525 - gmx:100784482 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01014 4 292842326 292845607 Vifa4g01014 4 292842326 292845607 ECH