Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00984 ATGGGAAACAGTGAAGATGGGAAATCCCTTAAGATTGAAAGGCCTTCTTCACCTGTAACAACTGATGAGACCAATCAAATCAACCAGCCTAACATTCATGTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCAAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTAGCTTCTGGTCATCCTCCTCACCCATACATGTGGGGACCACCACAGCCTATGATGCATCCATATGGGCCGCCGTATGCACCATTTTATTCACATGGAGGGGTTTATACTCACCCAGGGGTTGCCATCGGGACAAATTCACACGGTCAAGGAATTCCATCTTCACCCCCTGCTGGGACTCCTGCAAGCATAGAGACACAAACCAAACCACCTGGAAACACTGATCGGGGTTTAGTAAAAAAATTGAAAGAATTTGACGGGCTTGCGATGTCAATAGGCAATGGCAATGCTGAGAGTGCTGAGCATGAAGCGGAAAACCGGCTATCTCGGAGTGTGGATACCGAGAGTTCCAATGATGGTAGTGATGGCAACACTACAGGGACCAATGGAACAAGAAAAAGAAGCCGGGATGAAACACCAACAACCACTGATGGAGAAGGGAAAACTGTGATGCAAATTAGTCCAATTTCTAAAGAGACAGCAGCTTCCAAAAAGATGGTGCCAGTTACCCCAACCAGTGTTGCAGAAAAATTTGTTGGACCTGTACTTTCTTCATGTATGACCACTGCACTGGAGCTGAGGAACCCTTCAACTGTTCCCACCGGTGCTCCACAACCTTGTGGAGTATTGCCACCCGAACCTTGGATGCAGAATGAGCGTGAGCTGAAACGAGAGAGGAGGAAACAATCGAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGGCTGAAGAATTGGCACGAAGAGTTGATGCATTGACTGCTGAGAATTTGGCGCTGAAATCAGAAATAAGTGAATTTGCTGAAAACTCTGAGAAGCTGAAGATAGAAAATGCTACATTAAAGGAAAAGCTGAAAAACACTCAACTGGAACAGACAGAAGAGATAAACACCATTGACAAGAGAGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCAAACCCTGGTGATAGAACAGCCGAGGAAGAGAATGGTTTCTGTGAGAACAAACCTAACGCTGGTGCAAAACTGCATCAACTACTTGATGCAAATCCTAGAGCTAATGCCGTGGCAGCTAGTTGA 1260 0.4571 MGNSEDGKSLKIERPSSPVTTDETNQINQPNIHVYPDWAAMQAYYGQRVNIPPYFNSAVASGHPPHPYMWGPPQPMMHPYGPPYAPFYSHGGVYTHPGVAIGTNSHGQGIPSSPPAGTPASIETQTKPPGNTDRGLVKKLKEFDGLAMSIGNGNAESAEHEAENRLSRSVDTESSNDGSDGNTTGTNGTRKRSRDETPTTTDGEGKTVMQISPISKETAASKKMVPVTPTSVAEKFVGPVLSSCMTTALELRNPSTVPTGAPQPCGVLPPEPWMQNERELKRERRKQSNRESARRSRLRKQAEAEELARRVDALTAENLALKSEISEFAENSEKLKIENATLKEKLKNTQLEQTEEINTIDKRATPVSTENLLSRVNNSNPGDRTAEEENGFCENKPNAGAKLHQLLDANPRANAVAAS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00984 419 MobiDBLite consensus disorder prediction 171 188 - -
Vifa4g00984 419 CDD bZIP_plant_GBF1 282 330 IPR045314 GO:0003700|GO:0006355
Vifa4g00984 419 MobiDBLite consensus disorder prediction 373 398 - -
Vifa4g00984 419 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Vifa4g00984 419 Coils Coil 290 352 - -
Vifa4g00984 419 Pfam bZIP transcription factor 277 339 IPR004827 GO:0003700|GO:0006355
Vifa4g00984 419 MobiDBLite consensus disorder prediction 150 226 - -
Vifa4g00984 419 MobiDBLite consensus disorder prediction 14 28 - -
Vifa4g00984 419 MobiDBLite consensus disorder prediction 254 303 - -
Vifa4g00984 419 Gene3D - 280 355 - -
Vifa4g00984 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 279 342 IPR004827 GO:0003700|GO:0006355
Vifa4g00984 419 MobiDBLite consensus disorder prediction 275 303 - -
Vifa4g00984 419 SMART brlzneu 277 341 IPR004827 GO:0003700|GO:0006355
Vifa4g00984 419 MobiDBLite consensus disorder prediction 104 131 - -
Vifa4g00984 419 MobiDBLite consensus disorder prediction 202 217 - -
Vifa4g00984 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 284 299 IPR004827 GO:0003700|GO:0006355
Vifa4g00984 419 MobiDBLite consensus disorder prediction 104 135 - -
Vifa4g00984 419 MobiDBLite consensus disorder prediction 1 28 - -
Vifa4g00984 419 Pfam Disordered region downstream of MFMR 133 257 - -
Vifa4g00984 419 SUPERFAMILY Leucine zipper domain 280 336 IPR046347 GO:0003700|GO:0006355
Vifa4g00984 419 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 379 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00984 1 418 bZIP Transcription Factor Family AT2G46270 48.826 2.78e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vifa4g00984 MFMR_assoc 6.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00984 K09060 - gmx:778133 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00984 4 285380588 285384755 Vifa4g00984 4 285380588 285384755 ECH