Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00975 ATGCACCGATGTAATAGCAAATCACCAAACCCATCTCTTATCTCTCACCTCACTCCATCATCTTCCAAACCAATTTCTCCTTTTCATAAACCCTATTCCCAATCTTCTAAACTTCAACTTCAATTTCCCCACTTCCCATTCCTAAAAGAAAAACCATACTATTATCATTATTATCCAAAACTCAAAACTGGAGTTCCTTCCCTGAGAAATGCCAAGTGTGGTATCACTTCACGACCCGAAGAATCCGTCGCTAACTCTAACCCTTCTTTTACCGACGGCGTCGCCACCAAGGATATCCACATCGATCCTTTCACTTCTCTCTCTATCCGAATCTTTCTTCCTCACTCCGCTCTTTCTCCTCCCGAGCCTCATTCCAAACCTAACTCCAAACCTAAACAACAAGCTCCCGAACTTGGATCTGTACGGAGAAGTAGCTATGGTCCTCCGTTCAGGGAAGAGCAGCTCCGAGGGAGGAATAGTAACGCTGTTGAGGGTTTGAATTTGATGGGCGCTGGTGTTGAAACCGGTGCCGGTTTGTACCGTGGTTACTCGCCGGCGTTGGATAATCGGCTGAGGAAATTATCGGTGATGTTACAGTTTCATGGTGGGGGGTGGGTTAGTGGTAGTAATGATTCGGTGGCGAACGATTTGTTTTGTCGGCGGATCGCCAAGCTTTGTGATGTGATTGTCGTTGCGGTTGGGTATAGGTTGGCGGTTGGGGAGTTTAACAAGGATAATCATAGGCATATTGTTGATTCTTTTGGTGCTTCAGTGGTGGAGCCTTGGTTGGCTAGTCATGGATATCCAACAAGGTGCAAGCCATACATAGCTATGATTTGTCTTCAATTTGGTTTTGCTGGTATGAATATAATAACAAAAGTATCGCTCAACCGAGGAATGAGTCACTATGTTCTTGTTGTTTATAGACATGCTTTTGCTACAGCAGCTATTGCTCCATTCGCTATAGTTCTTGAGAGGAAGATAAGGCCAACGATTACGTTTCTTATGTTCATGCAAATGTTTGTATTGGGACTCCTCGGGCCTGTGATTGATCAGAATCTATACTATGCTGGGTTGAAATTCACATCTCCAACATACTCTTGTGCTATTAGCAATATTCTCCCTGCAATGATTTTTGTAATGGCTGTTATTTTCAGTGACATTAAGACAATATTCAGCACAACTTTCACTGACAGCCATACTGCAGCCTATGCTGGTATAATATCATCAGGTCTTACATATTATGTACAAGGAATTGTGATGCAAAAGAAAGGACCAGTTTTTGTGACTGCTTTTAGTCCTTTGATGATGATCATTGTAGCAATCATGGCCACTTTCATCCTTGCTGAAAAATTATATCTTGGAGGTGTTATTGGAGCAATTTTGATCGTAATAGGACTTTACTCCGTTCTATGGGGCAAAAACAAAGAAAACAAAGAGATTGAAGCGGAAACAAAAACAGAAAGAACGGAGTGTTGTGTAAAAATTTGGAGGCTGGTTATGTTAAGGGGAATTGGGTCTTCTTTTAAGATGAGTGTATATATCAGTATACTGATTATTTAG 1563 0.4178 MHRCNSKSPNPSLISHLTPSSSKPISPFHKPYSQSSKLQLQFPHFPFLKEKPYYYHYYPKLKTGVPSLRNAKCGITSRPEESVANSNPSFTDGVATKDIHIDPFTSLSIRIFLPHSALSPPEPHSKPNSKPKQQAPELGSVRRSSYGPPFREEQLRGRNSNAVEGLNLMGAGVETGAGLYRGYSPALDNRLRKLSVMLQFHGGGWVSGSNDSVANDLFCRRIAKLCDVIVVAVGYRLAVGEFNKDNHRHIVDSFGASVVEPWLASHGYPTRCKPYIAMICLQFGFAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFAIVLERKIRPTITFLMFMQMFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNILPAMIFVMAVIFSDIKTIFSTTFTDSHTAAYAGIISSGLTYYVQGIVMQKKGPVFVTAFSPLMMIIVAIMATFILAEKLYLGGVIGAILIVIGLYSVLWGKNKENKEIEAETKTERTECCVKIWRLVMLRGIGSSFKMSVYISILII 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00975 520 Pfam EamA-like transporter family 274 387 IPR000620 GO:0016020
Vifa4g00975 520 Pfam EamA-like transporter family 402 471 IPR000620 GO:0016020
Vifa4g00975 520 MobiDBLite consensus disorder prediction 118 154 - -
Vifa4g00975 520 PANTHER WAT1-RELATED PROTEIN 401 483 IPR030184 GO:0016020|GO:0022857
Vifa4g00975 520 MobiDBLite consensus disorder prediction 1 32 - -
Vifa4g00975 520 SUPERFAMILY alpha/beta-Hydrolases 107 292 IPR029058 -
Vifa4g00975 520 Pfam alpha/beta hydrolase fold 197 238 IPR013094 GO:0016787
Vifa4g00975 520 SUPERFAMILY Multidrug resistance efflux transporter EmrE 401 476 - -
Vifa4g00975 520 SUPERFAMILY alpha/beta-Hydrolases 181 238 IPR029058 -
Vifa4g00975 520 Gene3D alpha/beta hydrolase 67 256 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00975 Vifa-Chr4 283044329 283048085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00975 74 272 Carbohydrate Esterase AT3G27320 48.536 1.30e-57 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00975 - - gmx:100775445 250.751