Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00958 ATGGGTGGCGAATCCGGAAGCACCGTGACGGCAGCGACTGGCGGCGATTCGTTGTTTGAAAAGATCCCAGAGAAGCTTCACTTTGACGAATCGTCCTCCGATTCCGACTCCGATTCTCATTCCGAATCTGTTAAACCGGAGATTTCATCAGTTAAGGACAAGGTTTTTCGCCTTTTTGGAAGGGAGAAGCCCGTTCACTCCGTTCTCGGCGGCGGAAAGCCTGCTGATGTCTTATTATGGAAGAACAAGAAGATATCTGGTGGTGCACTCGGTGTTGCAACTGCTATTTGGGTTTTCTTTGAGCTGCTTGAGTACCACTTTCTTACCCTCATTTGTCACAGTTCGATTCTGGTTCTTGCACTATTGTTCTTGTGGTCCAATGCTCATACATTTATTCACAAGACTGCTCCTCACATCCCAATTGTTCATCTTCCTGAAGAACCAATTCTGCAGTTTGCAGCTGCATTGAGAATTGAAATTAACAGAGGATTTACTGCCTTGCGTGATATTGGTTCTGGAAGAGATTTGAAGAAACTCCTTGGTGTTGTTGTTAGCTTGTGGATTCTATCAAAATTGGGAAACTGTGTCAATTTCTTGACCTTGTTCTACCTAACCTTTGTTTTGTTGCACACAGTTCCTTTCTTTTATGATAAGTTTGAGGACAAGATAGACCCTCTGGCTGAAAAGGCGTTCATCGAGATTAAAAAGCAGTATGCAGTGTTTGATGAGAAGGTCTTGAGTAAGGTCTTGAGTAAGATCCCAATAAGTTCATTGAAAGGCAAGTTAGCTTAG 792 0.4331 MGGESGSTVTAATGGDSLFEKIPEKLHFDESSSDSDSDSHSESVKPEISSVKDKVFRLFGREKPVHSVLGGGKPADVLLWKNKKISGGALGVATAIWVFFELLEYHFLTLICHSSILVLALLFLWSNAHTFIHKTAPHIPIVHLPEEPILQFAAALRIEINRGFTALRDIGSGRDLKKLLGVVVSLWILSKLGNCVNFLTLFYLTFVLLHTVPFFYDKFEDKIDPLAEKAFIEIKKQYAVFDEKVLSKVLSKIPISSLKGKLA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00958 263 PANTHER RETICULON 41 249 - -
Vifa4g00958 263 Pfam Reticulon 75 230 IPR003388 -
Vifa4g00958 263 ProSiteProfiles Reticulon domain profile. 74 263 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00958 Vifa-Chr4 278594580 278596385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00958 - - mtr:25500807 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00958 4 278594580 278596385 Vifa3g02850 3 799939151 799940979 ECH
Vifa4g00958 4 278594580 278596385 Vifa4g00958 4 278594580 278596385 ECH
Vifa5g01650 5 487209254 487212952 Vifa4g00958 4 278594580 278596385 PCT