Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00933 ATGAAGGAAAATAGCAGCCTTGGGGTGATTCGGCTGAGTGTGCATACTACACCGGTGGAGTTGCGTGAGAAACTTGCTATACCAGAAACTTGCTACACCGGTGGATTAGTTTTGCAGCCAGTGTTGTCTATAGCAGATCACAAAGAAAAGTCGTTTCTTCAAATTCCACTAGATTACAGTGCTATAGCTACAAGTGCTCTGGATACCGTCAGTGAACGCTTGGTTCAAGATGCTCTCAACCATTTGATGAAGGGGAGGACAACATTAGTCATAGCTCACAGGTTAAGCACAGTTCAAAATGCTTATCAAATTGCACTCTGTTCAGATGGGAGGGTTGCGGAACTAGGCACTCATTTTGAGCTGTTGGCTAAAAAGGGCCAGAAATTTGGTTGTGATGAGAAAACTATCAAAGCGGTTTGTGTACAAAATTCAGTACAAAGGGATCAGCTAGGAGGCAGTGATATATATGAAACAGTTCGTTCTGAAGTTATGCGGGCTATTTTTGAGATTCAGATTGACCTCGAAAGTGCTATTCAAGTGAGTAACGCTACAGCCGTTACTGTCACCGATATGGCTGATATTCATCCTGACTTGCTAAGCCCTGGTACAATAGAATTAGCATTGGAGACTAGAAGAGAGTATACCAAAAAGCTTGAAGAAGCCAAAGAGCGAGCTAGACGTCTTAGAGCAGATCTGGCAGTTGAAGAACATCGAGTGAGAGAACTGGATAGAATCTTGAGAGAAGTTCTTCCATATCCCAAGACTCCTAATATACCAAAGTCTCGTCCATCAAGAAAATCTAGCATTGAAAGAAAAAGGATGTCGAAACGTCTTGCAGAAGATGGCAAGGCTTATTTTGACGAGTGTGTATCACTATCAACATTCGATAGTTCGGACTTTTCATCTCAAGAGGATCCTCCGCTCAGTATGGTTGGTCCACCTACTCCATCTCGTTTAACCGAGCAATCCGGCACTCGAGAACAATCACACCATATCCATTATGACACAATGCAGCCACCAGCCAGCATTGATTCCGAGGAAGCTATCCATGAACAAGTCAGCTCAACTGCTGATAGCAAAGAAACTGACTCTAAACACTGCTTCTCCTTTGCACAGAAACCATCTGAAGGCACTACAGCTCAACAAGATATCCAACAATACATAAAAAAGTTTGAAAAAAGTGTTTCAAAGTTGCCAAGTATGAGATCAAGTTATGGTGACATGTGTGACTATAGTTTCCAATCATCAGCTGAGAGCTTGTTGATTGACAGGGTGATGCTAAGAAGTAGAATTGAATCTGGTAGGTTTTTACTCTGTGGTGGTGGTAACTTTTGGTCACCTTGA 1344 0.4241 MKENSSLGVIRLSVHTTPVELREKLAIPETCYTGGLVLQPVLSIADHKEKSFLQIPLDYSAIATSALDTVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAYQIALCSDGRVAELGTHFELLAKKGQKFGCDEKTIKAVCVQNSVQRDQLGGSDIYETVRSEVMRAIFEIQIDLESAIQVSNATAVTVTDMADIHPDLLSPGTIELALETRREYTKKLEEAKERARRLRADLAVEEHRVRELDRILREVLPYPKTPNIPKSRPSRKSSIERKRMSKRLAEDGKAYFDECVSLSTFDSSDFSSQEDPPLSMVGPPTPSRLTEQSGTREQSHHIHYDTMQPPASIDSEEAIHEQVSSTADSKETDSKHCFSFAQKPSEGTTAQQDIQQYIKKFEKSVSKLPSMRSSYGDMCDYSFQSSAESLLIDRVMLRSRIESGRFLLCGGGNFWSP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00933 447 Gene3D - 63 131 IPR027417 -
Vifa4g00933 447 MobiDBLite consensus disorder prediction 252 275 - -
Vifa4g00933 447 MobiDBLite consensus disorder prediction 297 341 - -
Vifa4g00933 447 Coils Coil 204 238 - -
Vifa4g00933 447 PANTHER OS11G0129800 PROTEIN 132 442 - -
Vifa4g00933 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 126 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00933 Vifa-Chr4 271969597 271973787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00933 63 137 Calmodulin-binding Proteins AT2G36910 56.000 5.17e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00933 - - gmx:100790310 405.601