Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00925 ATGTCTGAGAATTTGTGCAAACTGCAGGCTGGGTCAATAGAGGGTCAAGTGCTGGAAATTGGTCTTACTAGCACATCATTGCTGAGTCCTGAGAAGTTCCCAGTCATTGTGCCAAACTCCTTTTTCTCGAGCCAGGTAATTGTGAACAAGTCCCGTGCCGATTATCGTGCCATTATTACCAAAATTCCCTTGCAAATTGAGGATCTAAGTAAGATCCCCCAGATATCAAATGATGTAAAAAGCATGTTAGCATCAAATGCGAAAGTTTTCTTAGGAAAAGATGTTCCCTACTGTTTCTTGTCACGTATTGAAAGTTCGTTTGCAGAACTGACTCTTGGATACAACCTCAAGCACATGCGAAAAGATGAGTTCTATGCTGCAGAACAAGATATTCTCCTGCAAGCAGTTCAGGTCATTAAGAATCACGGTGCTGCTCTTGGCAGCACATGGAATGACACTAAGTAA 465 0.4215 MSENLCKLQAGSIEGQVLEIGLTSTSLLSPEKFPVIVPNSFFSSQVIVNKSRADYRAIITKIPLQIEDLSKIPQISNDVKSMLASNAKVFLGKDVPYCFLSRIESSFAELTLGYNLKHMRKDEFYAAEQDILLQAVQVIKNHGAALGSTWNDTK 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00925 154 Gene3D - 7 49 IPR023408 -
Vifa4g00925 154 SUPERFAMILY Sm-like ribonucleoproteins 9 50 IPR010920 -
Vifa4g00925 154 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 9 149 - -
Vifa4g00925 154 Pfam Mechanosensitive ion channel 9 144 IPR006685 GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00925 8 153 Mechanosensitive Ion Channel Family AT4G00290 65.753 8.50e-69 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00925 K22047 - gmx:100814954 259.225