Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00896 ATGGCTCACAAAATTACCAAAAAAGAAGAAACGGAGTTCAAGGTTCCTGAAACCATCACACCATGCATCAACCCTCCAACCACCGCCACAACAACCACCGTAGCAGAGCCGTCTAGATTTTTCAACGACAACAATTCAACACCCAGATCCGCCACGTCATCACGCTCCCCGAAACGATCTCATCCTAGCGAGGCCGATTCAGAACTTCAACTTCAAACGACGTCGTCTGAAGCCAAACGCGCTGTTAACCGTTGCTCCGGTTGTAGAAAGCGAGTCGGTCTTACCGGATTTCGTTGCCGTTGCGGTGATCTTTTCTGCTCCGAGCATCGTTACTCCGATCGTCATGATTGTTCGTATGACTACAAAGCTGCAGGACGGGAAAGTATTGCTAGAGAAAATCCTGTTGTGAGAGCGGCCAAGATCGTTAAGCTCTGA 435 0.492 MAHKITKKEETEFKVPETITPCINPPTTATTTTVAEPSRFFNDNNSTPRSATSSRSPKRSHPSEADSELQLQTTSSEAKRAVNRCSGCRKRVGLTGFRCRCGDLFCSEHRYSDRHDCSYDYKAAGRESIARENPVVRAAKIVKL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00896 144 FunFam Zinc finger AN1-type containing 6 58 140 - -
Vifa4g00896 144 PANTHER AN1-TYPE ZINC FINGER PROTEIN 42 143 - -
Vifa4g00896 144 ProSiteProfiles Zinc finger AN1-type profile. 79 125 IPR000058 GO:0008270
Vifa4g00896 144 MobiDBLite consensus disorder prediction 1 15 - -
Vifa4g00896 144 MobiDBLite consensus disorder prediction 21 58 - -
Vifa4g00896 144 SUPERFAMILY AN1-like Zinc finger 69 138 IPR035896 -
Vifa4g00896 144 Gene3D - 45 140 IPR035896 -
Vifa4g00896 144 Pfam AN1-like Zinc finger 85 122 IPR000058 GO:0008270
Vifa4g00896 144 MobiDBLite consensus disorder prediction 1 76 - -
Vifa4g00896 144 SMART AN1_Zf_4 85 122 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00896 Vifa-Chr4 258672472 258672906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00896 64 144 C2H2 Transcription Factor Family AT3G52800 55.556 2.38e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00896 - - lja:Lj3g3v0478150.1 192.971