Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00792 ATGATTCAATCATTTTCTGATAAGATTAACTTTGGCGGGACTTTTGCATTGGTGTATCTAATCACGGTGGTACCATGGCGCATGACCACACAAGAAGAGCCGGGGATTCTAGTCAACATGACTCTCGTTACAACTGCACGTGATAGCGATGCTCTTTGTTTGGATGGGAGTTTACCGGGTTATCATTTGCACAGAGGTTATGGAGCAGGGAAGAACAATTGGCTTCTACAATTTGAGGGTGGTGGATGGTGCAATGACTTGCAATCATGCTTGGAGAGAGCACCAACTCACAGGGGTTCAACATTGCACATGAACAAGTTTGAGAGTTTCTCTGGTATTTTAAGCAACAATGCCACCCTTAATCCAGACTTTTACAATTGGAACCGGGTGAAACTGAGATATTGTGATGGAGCTTCATTTACTGGAAACAAAGTGTTCAAAAATGAGACAACAACACTTTACTTTAAAGGGCAAAAGATTTGGGAAGCCATTATTGAGGATCTTCTACCAAAAGGTTTAGGAAAAGCATACAAGGCTTTGCTTTCTGGCTGCTCAGCAGGAGGTTTAGCCACCTTTCACCATTGTGACAACTTCACTAACTATTTGCCAACAAATGCTTCTGTTAAATGCTTGAGTGATGCAGGTTTTTTTCTTGATGGAAGAGATGTCAGTTTGAACCACACTATGAGGTACTTTTTCAAAAGTCTAGTTACATTGCAGGGGATAGAGCAGAATCTTAATGAAAATTGCACCAGTGCACTTTCCGATCGAGACTTGTGCTTCTTTCCACAATATGCGTTGAAATATATATCAACACCGTTTTTTATATTGAACTCTGCCTATGACGTATTCCAATTCCATCATATCCTGGCGCCACCTTCGGCTGATCCCCTCGGGCACTGGAGTCACTGCAGGGTGAACAAATCGACATGCACACCAGCCCAAATTAATACATTGCAAGGTTTTAGGCTTAGCATGCTTGCAGCTTTGAAACCATTCCACTTTTATTCGAACAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATTGCAAGAAACATGGTTTGGAGACGAGTCTCCTAGAATAAACAACAAGACTATTGCAGAAGCAGTTGGTGATTGGTATTTTAATAGAAACATAAGCAAGCAAATTGACTGTCCGTATCCATGTGATAAAACTTGTCGTAACTTAATACCATAA 1215 0.4099 MIQSFSDKINFGGTFALVYLITVVPWRMTTQEEPGILVNMTLVTTARDSDALCLDGSLPGYHLHRGYGAGKNNWLLQFEGGGWCNDLQSCLERAPTHRGSTLHMNKFESFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGNKVFKNETTTLYFKGQKIWEAIIEDLLPKGLGKAYKALLSGCSAGGLATFHHCDNFTNYLPTNASVKCLSDAGFFLDGRDVSLNHTMRYFFKSLVTLQGIEQNLNENCTSALSDRDLCFFPQYALKYISTPFFILNSAYDVFQFHHILAPPSADPLGHWSHCRVNKSTCTPAQINTLQGFRLSMLAALKPFHFYSNRGGMFINSCFAHCQSELQETWFGDESPRINNKTIAEAVGDWYFNRNISKQIDCPYPCDKTCRNLIP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00792 404 PANTHER NOTUM-RELATED 36 401 IPR004963 GO:0016787
Vifa4g00792 404 Pfam Pectinacetylesterase 35 384 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00792 Vifa-Chr4 233796718 233813562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00792 14 404 Carbohydrate Esterase AT5G23870 65.649 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00792 K19882 - gmx:100802358 664.84