Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g00764 | ATGGACAAGGGACCACCTCCTACCCTCTTTGTCAATGATGGTTCATTTATGGAGAGGTTCAGGCAGCTCCAACAAGAGCAGGAGAAGGGGAAAAATGCCAAACCAGAAGAATCTAAACCAGTTAAAGTTGTTTCAGGACCTCTGAATCCTAAACCCTCCATTAGTAAGGCTAATGATGCTAAGAAACCTTCTCAGGGCAGTTCCAGTGGCAAACTTGCTTTCAGCTTGAAACAAAAGTCAAAGCTTGTGCCGGCCCCTGTTAAGTTGGCCGATGACGATGAAGATGAAATAGATGCTGGTTATGTTTCAAACGATGCACCTACAAAACGACAAAAATTGGTTCAGGATGATGGCATTGAGCAAGTATCAAGACAACTTGATGTTGCACCTCCTCCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGGCCATTTGAGGATGTTACACGGCAAAAGAACCCCGGGGATACACCTTTCAAGTTTTTATTTGATGTTAAATGTCCAGACTATAAATATTATGAACATCGGCTTGCTCAAGAGGAGAAGGCCCTTTCACAGTTCAAGGAACCACAGGCAAATCAAAATGTGACAAGCATTCCATCTTCCAGACCAACAAATGGTCCTCAGAGATCATCCCAGCAACATTCAACTTACCAAATCCCTGCCTCTGCTTTATATGATAGCGTTGAAGTGTCAAGGACTTCTGGATCTTCAGTTCAAGCATTTTCAGTTGGAAGCTCAGATGAGCCCAGTGGATCAACAAGTGCCAGTTCTTTAGCGCTAATGGAGTTTTACATGAAGAAAGCTGCACAAGAAGAGAAGTTCAAACAACCTAAGCATTCAAAAGATGAGATGCCCCCTCCTCCTTCTCTTCAAGTTTCAACCTTTGATGCATCTGCTTCAGGGAAAAAGGGCCATCACATGGGTGATTATATTCCTCAGGAAGAACTTGAAAAGTTCTTGGCTAGCTGTAACGACGCTGCAGCAATGAAAGCTGCTAAGGAGGCTACAGAGAAGGCCAAAATTCAGGCGGATAATGTAGGCCACAGGCTTTTATCAAAAATGGGTTGGAAAGAAGGTGAGGGTCTAGGTGGTTCTAGGAAGGGTATTTCAGATCCTATCATGGCAGGCAATGTGAAGAAAGATAACTTGGGGGTAGGTGCTGTCCAACCTGGGGAGGTGACTCCTGAAGATGACATCTATGAGCAGTACAAAAAGAGGATGATGCTTGGCTACCGTCACAGACCGAATCCTCTGAACAATCCCCGCAAGGCTTACTATTGA | 1317 | 0.4427 | MDKGPPPTLFVNDGSFMERFRQLQQEQEKGKNAKPEESKPVKVVSGPLNPKPSISKANDAKKPSQGSSSGKLAFSLKQKSKLVPAPVKLADDDEDEIDAGYVSNDAPTKRQKLVQDDGIEQVSRQLDVAPPPPSDPTVKKVADKLASFVAKNGRPFEDVTRQKNPGDTPFKFLFDVKCPDYKYYEHRLAQEEKALSQFKEPQANQNVTSIPSSRPTNGPQRSSQQHSTYQIPASALYDSVEVSRTSGSSVQAFSVGSSDEPSGSTSASSLALMEFYMKKAAQEEKFKQPKHSKDEMPPPPSLQVSTFDASASGKKGHHMGDYIPQEELEKFLASCNDAAAMKAAKEATEKAKIQADNVGHRLLSKMGWKEGEGLGGSRKGISDPIMAGNVKKDNLGVGAVQPGEVTPEDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY | 438 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 283 | 317 | - | - | |
Vifa4g00764 | 438 | Pfam | G-patch domain | 356 | 399 | IPR000467 | GO:0003676 | |
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 58 | 75 | - | - | |
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 197 | 233 | - | - | |
Vifa4g00764 | 438 | Gene3D | Surp module | 113 | 196 | IPR035967 | GO:0003723|GO:0006396 | |
Vifa4g00764 | 438 | ProSiteProfiles | G-patch domain profile. | 355 | 402 | IPR000467 | GO:0003676 | |
Vifa4g00764 | 438 | ProSiteProfiles | SURP motif repeat profile. | 141 | 184 | IPR000061 | GO:0003723|GO:0006396 | |
Vifa4g00764 | 438 | SMART | surpneu2 | 139 | 193 | IPR000061 | GO:0003723|GO:0006396 | |
Vifa4g00764 | 438 | SUPERFAMILY | Surp module (SWAP domain) | 121 | 192 | IPR035967 | GO:0003723|GO:0006396 | |
Vifa4g00764 | 438 | SMART | G-patch_5 | 353 | 400 | IPR000467 | GO:0003676 | |
Vifa4g00764 | 438 | PANTHER | ARGININE/SERINE RICH SPLICING FACTOR SF4/14 | 2 | 438 | IPR040169 | - | |
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 194 | 233 | - | - | |
Vifa4g00764 | 438 | Pfam | Surp module | 140 | 190 | IPR000061 | GO:0003723|GO:0006396 | |
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 24 | 139 | - | - | |
Vifa4g00764 | 438 | MobiDBLite | consensus disorder prediction | 24 | 38 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa4g00764 | Vifa-Chr4 | 224367857 | 224371404 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g00764 | 341 | 438 | C2H2 Transcription Factor Family | AT5G26610 | 32.743 | 7.33e-09 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g00764 | K13096 | - | gmx:100786213 | 649.047 |