Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00759 ATGCAGTCCCTGCAATCATTTGCTTTCATTTTAATATTTGTAATTCTTGCATTTGATGTTTGTGAATCTAATGATTGTAGCAATCCCTTGAAGACCATTATTGTTAGTCAATCAGGCAAAGCAGATTTCGAAACAATTCAAAGTGCGATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCTGGTGTTTACAAAGAGAAAAATGCTACTTTCGATATAAAAGCAAGCAATACAGTTGCAAAGGGAATAACTTTTACGAATACATTGAACAGGCCAGTATTATTAGACGTGATTAACGTTGTACAAGCCAAAGCTGCGAAAATCCATGCAGATAAATGTGCTTTCTATAGCTGTTCTTTTCTTGAGGTGCAAGATACGATAAATGATGACGATGGTCGCCATTACTACAATAATTATTACATCCAAGGTTCAAGCGATTTCATATATGGGAATGGTCAATCACTCTTTGAGGCAAGTACAATATATTTTTCAAAAGGAAAATCTAGTCTGCAGCAGGATGGGGTTATTACAGCACAATATAGAGATTCACCAAATGATCCAAGTGGGTTTGTGTTTAAAAATTGTAACATAAGTGGAACAGGATATAAGACTCAACTTGGAAGGCCTATGGGAGCTTATGCAAGAGTCATCATAGCAAATTCTTACCTATCAGATGTTGTTAGACCTGAGGGTTGGAGTCAGTTAACATATGTCGGGCACGAAGAAAACCTTACTTTTGTCGAGGAGGGATGCACAAGATCTGGTGCAGACAAATCAAAACGCGTGAAATGGATGAAGAGTATGACTCGACCTGAACTTGATAAATTATTGAATATCTCTTTTATTGATCAAGAAGGATGGATTTCCAAATTGCCAACGAGCATATTCCATTAA 912 0.3684 MQSLQSFAFILIFVILAFDVCESNDCSNPLKTIIVSQSGKADFETIQSAIDSVPAGNSQWIHIQISSGVYKEKNATFDIKASNTVAKGITFTNTLNRPVLLDVINVVQAKAAKIHADKCAFYSCSFLEVQDTINDDDGRHYYNNYYIQGSSDFIYGNGQSLFEASTIYFSKGKSSLQQDGVITAQYRDSPNDPSGFVFKNCNISGTGYKTQLGRPMGAYARVIIANSYLSDVVRPEGWSQLTYVGHEENLTFVEEGCTRSGADKSKRVKWMKSMTRPELDKLLNISFIDQEGWISKLPTSIFH 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00759 303 Pfam Pectinesterase 74 273 IPR000070 GO:0030599|GO:0042545
Vifa4g00759 303 Gene3D - 19 73 IPR012334 -
Vifa4g00759 303 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 73 - -
Vifa4g00759 303 SUPERFAMILY Pectin lyase-like 31 299 IPR011050 -
Vifa4g00759 303 Gene3D - 74 302 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa4g00759 Vifa-Chr4 222571290 222572599 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00759 29 294 Carbohydrate Esterase AT1G05310 35.256 6.71e-49 166