Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00758 ATGCAGTCTCTACAATTATTTTCTTTCATTTTAATATTTGTAGTTCTTGTATTTGATATTTGTGAATCTAATGATTGTAGCAATCCCTTGAAGAGCATTAGTGTTAGTCAATCAGGCAAAGCAAATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATTCAAATATCCTCTGGTGTTTACAAAGAGCAAGTCTTAATTCCCAAAAACAAACCATGCATTTATCTTGAAGGAGCTGGTAGCAAGTCCACAAGTATAGAATGGGGCTCTCATGACATTGCTACTTTCTTATCAAAAGCAGATAATACAGCTGCAAAAGGCATTACTTTTACGAATACACTCAACAGCCCAGTATTATTAGATGCCACTAACATCACACAAGCAAGAGCTGCTAAAATCCATGCAGATAAATGTGCTTTCTATAGCTGTAGTTTTCTTGGAGTGCAAGATACCCTAAATGATGACTACGGTCGCCATTACTACAATAATTGTTACATCCAAGGTGCAGCCGATTTCATATATGGGCGAGGTCAATCACTCTTTGAGGCAAGTACAATATATTTTTCACCAGGAAAATCCGGTCTGAAAAACGATGGAGTTATTACAGCGCAGTATAGAGAATCACCAAATGATCCAAGTGGGTTTGTGTTTAAAGATTGTAACATAACTGGGACAGGAGGGAAGTTTCAACTTGGAAGAGCTATGGAAGCTTATGCAAGAGTTATCATAGCAAATTCCTACATATCAGACGCCGTTAGACCCGAGGGTTGGAATCAGACAACATATGTTGGCCATGAATCAAACCTTACTTTTGCGGAGGACGGATGCAAAGGACCCGGAGCAGACAAAACAAAACGTGTGAAGTGGATGAAGAATTTGAGTCGACCTGAACTTGATAAATTCTTGAGTAAGTCTTTTATTGATCAAGAAGGGTGGATTTCCAAATTGCCAACAAACATATTCCATTAA 996 0.3815 MQSLQLFSFILIFVVLVFDICESNDCSNPLKSISVSQSGKANFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQVLIPKNKPCIYLEGAGSKSTSIEWGSHDIATFLSKADNTAAKGITFTNTLNSPVLLDATNITQARAAKIHADKCAFYSCSFLGVQDTLNDDYGRHYYNNCYIQGAADFIYGRGQSLFEASTIYFSPGKSGLKNDGVITAQYRESPNDPSGFVFKDCNITGTGGKFQLGRAMEAYARVIIANSYISDAVRPEGWNQTTYVGHESNLTFAEDGCKGPGADKTKRVKWMKNLSRPELDKFLSKSFIDQEGWISKLPTNIFH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00758 331 Gene3D - 30 330 IPR012334 -
Vifa4g00758 331 SUPERFAMILY Pectin lyase-like 33 328 IPR011050 -
Vifa4g00758 331 Pfam Pectinesterase 33 318 IPR000070 GO:0030599|GO:0042545
Vifa4g00758 331 FunFam Pectinesterase 27 326 - -
Vifa4g00758 331 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 23 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00758 Vifa-Chr4 222517235 222518580 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00758 33 322 Carbohydrate Esterase AT1G05310 38.284 1.13e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00758 - - mtr:25501033 509.605