Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00756 ATGCAGTCTCTACAATTATTTTCTTTCATTTTAATATTTGTAGTTCTTGCATTTGATATTTGTGAATCTAATGATTGTAGCAATCCCTTGAAGAGCATTAGTGTTAGTCAATCAGGCAAAGCAGATTTCAAAACAATTCAAAGTGCCATTGATTCTGTCCCTGCAGGAAACTCTCAATGGATTCATATCCAAATATCCTCTGGTGTTTACAAAGAGCAAATATATATTCCAGAGAACAAACCATGCATTTATCTTGAAGGAGTTAGTAGGCAAACCACAAGTATAGAATGGAGTATACATGAGAATGCTACTTTCGAAACAAGAGCAATTAATACAGTTGCAAAGGGCATTACAATCGTGAATACATTGAACAACCCAGTGTTAGATGTGAATGACATCACACAAGGTGCAGCTGCTAGAATCCGTGCAGATAAATGTGTTTTCTATAGTTGTGGTTTTCTTGGGGTGCAAGATACTCTATTTTCTGAGATTGGTCGCCATTACTTCAAAAAATGTTTTATCCAAGGTGGAGTAGATTTCATATATGGGAATGGTCAATCAATCTTTGAGGAAAGTAATATATATTTTTCGATGGGGAGAAATGGTCCAAAAAGGGATGGAGTTATTACGGCACATTATAGAAATTCACCAAATGATCCAAGTGGATTTGTGTTTAATAGATGTAAAATAAGTGGCTTCGGAGGAAAGTTTCAACTCGGAAGGTCTATGGGAGCTTATGCAAGAGTGATCATAGCAAATTCTTACCTATCAGATGCTGTTAGGCCTGAGGGTTGGAGTCAGAGAACATATGTTGGCAATGAGACAACAATTGCTTTTGTGGAGGAGAAATGCTTTGGAGATGGATCAAACAAATCACAACGTGTGAAATGGATGAAGAGTTTGAGTGAGCCAGAACTTAATAAGTTCTTGAGTCTTTCTTATATTGATGATGGGTGGATTTCCGAATTGCCGACGAACATATTCAATTCAATGACTGATACTTTGAATGAAACAAATCATTTTGCTCTATGA 1032 0.3643 MQSLQLFSFILIFVVLAFDICESNDCSNPLKSISVSQSGKADFKTIQSAIDSVPAGNSQWIHIQISSGVYKEQIYIPENKPCIYLEGVSRQTTSIEWSIHENATFETRAINTVAKGITIVNTLNNPVLDVNDITQGAAARIRADKCVFYSCGFLGVQDTLFSEIGRHYFKKCFIQGGVDFIYGNGQSIFEESNIYFSMGRNGPKRDGVITAHYRNSPNDPSGFVFNRCKISGFGGKFQLGRSMGAYARVIIANSYLSDAVRPEGWSQRTYVGNETTIAFVEEKCFGDGSNKSQRVKWMKSLSEPELNKFLSLSYIDDGWISELPTNIFNSMTDTLNETNHFAL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00756 343 Gene3D - 30 332 IPR012334 -
Vifa4g00756 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 321 - -
Vifa4g00756 343 Pfam Pectinesterase 33 316 IPR000070 GO:0030599|GO:0042545
Vifa4g00756 343 FunFam Pectinesterase 27 324 - -
Vifa4g00756 343 SUPERFAMILY Pectin lyase-like 33 321 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00756 Vifa-Chr4 221891019 221892523 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00756 31 321 Carbohydrate Esterase AT5G47500 34.304 6.06e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00756 - - mtr:25501033 476.478