Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00744 ATGAGTATAAACTCTAGTTGTAGCGGTAGCGGTGGTGGTTGTAGTGGTGGTGGAAGTGGTGGAAGTGGTAGTGTTTGTGGTCCTTGTGGCGCGTGCAAGTTTTTGAGGAGGAAGTGTGTCCCGGGGTGTATCTTTGCGCCTTACTTTGATTCGGAGCAAGGCGCTTCACATTTCGCGGCAGTTCACAAGGTTTTTGGTGCTAGTAATGTTTCCAAGGTTTTACAGAATGTTCCGGTGCACAAGCGTCTTGATGCTGTCAGCACAGTTTGTTATGAAGCTCAAGCAAGGTTGAGAGATCCTGTTTATGGTTGTGTTGCTCATATCTTTACTCTTCAGCAACAGGTGATGAGTTTACAAGCAGAACTCGCCTACTTACAAGGCCACCTAGCCACATATCAAGTCCCTCAACCACCACCACAAGCACTTCCAATGGTCTCTTCTTCATCCATTCCACCCACATATGACTTATCTTCACTCTTTGATCCTATGGCACAAACTTCTTCATGGGCCATGCATCAAAGGACTAATGAGCCTCGTCAATATTTGGGTAGCGGCACATCAACTACAAGTAGCAATAATGATGGTGGTCTTCAAATATTGGCAAGAGAGCTTTTGCATAGATATGGATCTGCTCCTTCTTCTCATTCTCTTTCCAAATGA 660 0.453 MSINSSCSGSGGGCSGGGSGGSGSVCGPCGACKFLRRKCVPGCIFAPYFDSEQGASHFAAVHKVFGASNVSKVLQNVPVHKRLDAVSTVCYEAQARLRDPVYGCVAHIFTLQQQVMSLQAELAYLQGHLATYQVPQPPPQALPMVSSSSIPPTYDLSSLFDPMAQTSSWAMHQRTNEPRQYLGSGTSTTSSNNDGGLQILARELLHRYGSAPSSHSLSK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00744 219 MobiDBLite consensus disorder prediction 1 21 - -
Vifa4g00744 219 Pfam Lateral organ boundaries (LOB) domain 28 126 IPR004883 -
Vifa4g00744 219 ProSiteProfiles LOB domain profile. 27 129 IPR004883 -
Vifa4g00744 219 PANTHER LOB DOMAIN CONTAINING PROTEIN 27 168 - -
Vifa4g00744 219 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00744 Vifa-Chr4 217457046 217458325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00744 31 219 AS2 family AT2G45420 55.455 2.97e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vifa4g00744 LOB 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00744 K21994 - gmx:100798425 288.885