Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00726 ATGTTCACAATGGAAGCTAACACAACTGGAGGTGGAGCACTGAAGAAGATAAAGAATAGTGAAATTGAAGAAGGGAAAAGGGTTGTTTTTGCAGTGAAACAAGAGATAGAAAGAAACCCTTTGATCACCGAAGCTCAAAGGCGTGAACTTGACCATCAAGTTTTCATTTTTAATCACTTTGCTTATAACCTTCCTCTTCCTCATTACCTTTTGCAGTTTCCAACTCTTGTGTCAGAATACGGTCGTCGAGGTTCTGATTACAGGACTATGTTGGATTCAGAACCACATAGGTGTAGAAGAACCGACGGAAAAAAATGGAGGTGTGGTAAGGACACAATACCTAATCAGAAGTATTGCGAACGCCACATACATAGAGGTCGAAATCGTTCAAGAAAGCTTGTGGAAACATCTCAACTTAACTCTCCTAATTTGAAAACAAAGCCTAGTAATGTTAGCTCACTTGCAAAACAAGTCTCGAAAATTGAGCCTGCAGTTTCAAATCCAAACCCTTTTGTCATTCAACACAGCCGTGCATTCTCATACACCCCATCGAGGAGCTTATGTGTTGTAAATAATCTGTCCAGTTGTAATCGACCGAGAAATGCCATAAGTTCTGATGCCACATTGGTGACTGTGGTGAGCGCTTCCTCGATCCTTCCCCCTGCAGTTAGACCTAAGGTGACCACTGCCTCGATCCTTCCCCCTGCAGTTAGACCTAAGGTGACCACTGCCTCGATCCTTCCCCCTGCAGTTAGACCTAAGGTGACCACTGCCTCGATCCTTGCCCCTGCAGTTCGACCTAAGGTGACCACTTCCTCGATCCTTACCCCTGCAGTTCGACCTAAGGTGACCACTTCCTCGATCCTTACCCCTGCAGTCCGACCTAATGTGACCACTGCCTCGGTCCTTGCCCCTGCAGTTGGACCCAAGGTGACCACTTTCGGAGGCATGTCATCCCTTAATTCGGATAACAGAAATCGTCTAAACGTATGCAAGCAAGGCTTCTCTCCAAAGAGTGTCCTTCAAGTTTCTGGTTGCAATGGTTCATACCTCAACGATAGGAACAGTATAGTAGAACCTGAACCCGGTAGATGCCGAAGAACAGACGGTAAGAGATGGCGATGCAAGAGCGCAGTTCTTCCAGGTCAGAAATATTGTGCAACACATATGCACAGAGGTGCTAAAAGACGTTGTGCAAACACCGAATCTTCTCCTTCTGCCATTGCTACTACAACTGCAGTTAGTTCAGATGTTACCATTGCTCGGTTGCCTTACGCTGCAGCAGCAACCGACATTCAGAAAGCTGACTGTCGAATTCCAAACACACAGCTTTCAATGCCAGTTCCAGAAAGTGCAGCACAATCCTTAGAATGTAAGAAGAAAAGTGGCGGCGGAAGCAGTGACACTGATACTAGTACTACCATCACTGACGCCATCGACGAGTGTAGCTATCTTTCTTTCTGA 1464 0.4597 MFTMEANTTGGGALKKIKNSEIEEGKRVVFAVKQEIERNPLITEAQRRELDHQVFIFNHFAYNLPLPHYLLQFPTLVSEYGRRGSDYRTMLDSEPHRCRRTDGKKWRCGKDTIPNQKYCERHIHRGRNRSRKLVETSQLNSPNLKTKPSNVSSLAKQVSKIEPAVSNPNPFVIQHSRAFSYTPSRSLCVVNNLSSCNRPRNAISSDATLVTVVSASSILPPAVRPKVTTASILPPAVRPKVTTASILPPAVRPKVTTASILAPAVRPKVTTSSILTPAVRPKVTTSSILTPAVRPNVTTASVLAPAVGPKVTTFGGMSSLNSDNRNRLNVCKQGFSPKSVLQVSGCNGSYLNDRNSIVEPEPGRCRRTDGKRWRCKSAVLPGQKYCATHMHRGAKRRCANTESSPSAIATTTAVSSDVTIARLPYAAAATDIQKADCRIPNTQLSMPVPESAAQSLECKKKSGGGSSDTDTSTTITDAIDECSYLSF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00726 487 ProSiteProfiles WRC domain profile. 92 136 IPR014977 -
Vifa4g00726 487 PANTHER GROWTH-REGULATING FACTOR 5 345 433 IPR031137 GO:0005634|GO:0006351|GO:0032502
Vifa4g00726 487 ProSiteProfiles WRC domain profile. 359 404 IPR014977 -
Vifa4g00726 487 Pfam WRC 94 135 IPR014977 -
Vifa4g00726 487 Pfam WRC 360 397 IPR014977 -
Vifa4g00726 487 MobiDBLite consensus disorder prediction 129 149 - -
Vifa4g00726 487 ProSiteProfiles QLQ domain profile. 41 76 IPR014978 GO:0005524|GO:0005634|GO:0006355
Vifa4g00726 487 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00726 Vifa-Chr4 212059897 212062057 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00726 332 431 GRF Transcription Factor Family AT4G37740 39.216 4.64e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00726 - - psat:127075792 691.419