Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00723 ATGGATATTTTGTACACCATGTTCACTTTCATAGCCTTCACTTTTCTAGCTCTTTTCCTATCCATATGTTTCATCATGATCACAACCTTCAAAGGAAAATCCATAGGTGATCCTAAATATGCACCTGTTAAAGGCACTGTGTTCAATCAAATTTTCTACTACAAGAAACTCCATGATTACCATACTCAATTGGTCAAAACGCATCCAACGATGAGGCTTCTTGCTCCATATCTAAGTGAGTTGTATACCATAGATGTCAGAAATATTGAACATGTGTTGAAAACAAATTTTGATAAATATTCTAAAGGTAAGTATAACCAAGATATTATCACTGATCTTTTGGGTGAGGGGATTTTTGTTGTTGATGGTGAAAAATGGAAGCAACAGAGAAAAGTTGCTAGCTATGAGTTCTCGACAAGAGTTCTTAGAGATTTTAGTTGTTCTGTCTTTAGAAAGAATACTGCCAAATTAGTTAAAGTGATATCAAAATTTTCTCAAGAGGATCTTCATTTTGATATGCAAGACTTACAAATGAGATGTGCTTTGGACTCAATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTAGAGGGATCAAGCAAAGAAGGAATTGAATTCATGAAAGCCTTTGATGAATCAAATGCTATAATTCACTGGCGCTTCGTTGATCCTTTTTGGAGCCTCAAGAGGTTTCTAAACATTGGTGGTGAAGCGAAGCTTAAGCATAATGTGAAATTGATAGATGAATTTGTGAATGGAGTCATAAAAAGCAAAAAGGAACAATTGACACTACAACAAGATTCTAATGTTAAAGAAGACATACTATCAAGGTTTTTAATGGAGAGCAAGAAAAGCGAAACAGATATAAGTGATAAGTATTTGAGGGATATAATTCTAAACTTTATGATAGCAGGAAAAGACACGACTGCGAACACTCTTTCATGGTTCTTCTACATGTTATGCAAGAACCCTCTTGTTGAGGCCAAGATTGTGCAAGAAATAAAAGATGTGACTTGTTGTAATCATGAAAGTGGAGTCAACGTAGATGAGTTTGTTGAGAATTTAAGAGATGAAATAGTTGATAAAATGCATTATCTTCATGCAGCTCTAACAGAAACGTTGAGATTGTACCCTATACTCGCTATAGATGGAAGAATTGCAGATGCACCTGATGTTCTTCCTGATGGACACAAACTCAAAAAGGGTGACGGAGTGTACTACTTGGCCTATGCTATGGGTCGAATGTCTTCTATTTGGGGGGAAGACGCGGAGGAATTTCGACCTGAAAGATGGATTAATGAAGGAATTTTTCAACCGGAATCGCCTTTCAAATTTGTGGCATTTCATGGTGGACCTCGCATGTGTTTAGGGAAGGACTTTGCATACAGACAAATGAAAATAGTAGCAATGACTCTTTTACATTTCTTCAAATTTAAATTGGAAAATGGTACAAAAAATGTGACTTATAAAGTCATGTTTACTCTTCACTTGGACAAGGGTCTCCCTCTCAATGCAATTCCAAGGTTTAGATCACTTGTGAAGTAA 1548 0.3592 MDILYTMFTFIAFTFLALFLSICFIMITTFKGKSIGDPKYAPVKGTVFNQIFYYKKLHDYHTQLVKTHPTMRLLAPYLSELYTIDVRNIEHVLKTNFDKYSKGKYNQDIITDLLGEGIFVVDGEKWKQQRKVASYEFSTRVLRDFSCSVFRKNTAKLVKVISKFSQEDLHFDMQDLQMRCALDSIFKVGFGTELNCLEGSSKEGIEFMKAFDESNAIIHWRFVDPFWSLKRFLNIGGEAKLKHNVKLIDEFVNGVIKSKKEQLTLQQDSNVKEDILSRFLMESKKSETDISDKYLRDIILNFMIAGKDTTANTLSWFFYMLCKNPLVEAKIVQEIKDVTCCNHESGVNVDEFVENLRDEIVDKMHYLHAALTETLRLYPILAIDGRIADAPDVLPDGHKLKKGDGVYYLAYAMGRMSSIWGEDAEEFRPERWINEGIFQPESPFKFVAFHGGPRMCLGKDFAYRQMKIVAMTLLHFFKFKLENGTKNVTYKVMFTLHLDKGLPLNAIPRFRSLVK 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00723 515 CDD CYP86A 69 502 - -
Vifa4g00723 515 PANTHER CYTOCHROME P450 25 502 - -
Vifa4g00723 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Vifa4g00723 515 Pfam Cytochrome P450 47 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 Gene3D Cytochrome P450 33 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00723 515 SUPERFAMILY Cytochrome P450 38 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00723 Vifa-Chr4 211082317 211084202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00723 1 509 Cytochrome P450 AT2G45510 60.118 0.0 655