Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00722 ATGAACACGTTGTTCTTGATCATGTTTTACTTCTTATCCGTTCTATTTCTCTTTCTCTTTCTTCTCATACTCACAACATTCATAGGACAATCCATAAAAAACCCTAAATTTCCACCAGTGAAAGGAACAGTCTTCCACCAATTAATCAACTTCAAAACGCTCTTCAATTACTTAACACAAATAGCACTAACCAATCCAACTTTCAGGCTTCTAGCTCCAAAGAAATCCAAGATCTACACGTCCGACACACGAAATGTGGAACACATACTCAAAACAAATTTCCACAATTACTCCAAAGGAAAGTTTAACCATGATACTATTTTTGATCTTTTTGGTGATGGAATTTTTGCTGTTGATGATGATAAATGGAGGCATCAGCGAAAGCTTTCTAGTGTTGAGTTTTCAACTAGAGTTCTTAGAGATTTTAGCTGCGATGTTTTCAGAAGGAATGCTGCTAAGTTGGTTAGAGTTGTCTTAGGGTTTTCTAATGCAGGAATGGTCTTTGATATGCAAGATATAGTAATGAAATGTACTTTGGACTCCATATTCAAAGTTGGGTTTGGAGTGGAATTGCAATCTTTGGAGAGATCAAGCAAAGAGGAAAATGTCTTCATGAAGGCCTTTAATGATTCAAATGCGTTCGTATTCAGACGCTATTTAGACCCTTTATGGAAGTTGAAAAGGGTTCTTAACTTTGGATCAGAAGCTTCCCTTAAGAAGAATATCAAGATAATTGATGATTTTGTGCATAGCATAATTAAGACCAAAAGGAAACTTTTATCAGTGCAAAATGATTTTAGTGATAAAGAAGATATACTTTCAAGGTTTTTGGTGGAAAGTAAAAAGGATCCTTCAAATATGACAGATCAATATTTGAGGGATATAATTCTAAACTTTATGATTGCTGGAAAAGATACAAGTGCAAACACTTTGTCATGGTTCTTCTACATGTTATGCAAGAACCCTCTTATACAAGAAAAAGTTGCACAAGAAGTAATAAATGTTACTTCTACTCAAGAAAGTAAACTCAATTCAGATGAGTTTGTGAACAATATTACAGATGATAATCTTGACAAAATGCATTATCTTCATGCTGCATTAACAGAAACATTGAGGCTATATCCTGCTGTTCCAATGACTGGTAGGACAGCGGAAGAAAATGATATACTTCCTGATGGGTACATGGTGAATAAGGGAGAAACAGTGTATTACTTGTCCTATGCTATGGGAAGAATGCCTTACATTTGGGGGGATGATGCTGAAGAATTCCTACCTGAAAGATGGCTTAAGGATGGAATCTTTCAACCAGAATCATCAATCAAATTCATTTCATTCCATGCTGGTCCTCGTATATGTTTAGGAAAAGAGTTTGCTTATAGACAGATGAAAATAGTAGCAATGGCACTTGTTAGACTCTTTAGATTTAAGTTGGCAAATGAAAGAGATCATGTGACATATAGGACCATGTTCACACTTCATATTGACAAAGGCCTCCCTCTTTATGCTGTTCCAAGGTGTCATGTATTTGAATAA 1533 0.3536 MNTLFLIMFYFLSVLFLFLFLLILTTFIGQSIKNPKFPPVKGTVFHQLINFKTLFNYLTQIALTNPTFRLLAPKKSKIYTSDTRNVEHILKTNFHNYSKGKFNHDTIFDLFGDGIFAVDDDKWRHQRKLSSVEFSTRVLRDFSCDVFRRNAAKLVRVVLGFSNAGMVFDMQDIVMKCTLDSIFKVGFGVELQSLERSSKEENVFMKAFNDSNAFVFRRYLDPLWKLKRVLNFGSEASLKKNIKIIDDFVHSIIKTKRKLLSVQNDFSDKEDILSRFLVESKKDPSNMTDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKNPLIQEKVAQEVINVTSTQESKLNSDEFVNNITDDNLDKMHYLHAALTETLRLYPAVPMTGRTAEENDILPDGYMVNKGETVYYLSYAMGRMPYIWGDDAEEFLPERWLKDGIFQPESSIKFISFHAGPRICLGKEFAYRQMKIVAMALVRLFRFKLANERDHVTYRTMFTLHIDKGLPLYAVPRCHVFE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00722 510 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 SUPERFAMILY Cytochrome P450 33 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PANTHER CYTOCHROME P450 22 498 - -
Vifa4g00722 510 CDD CYP86A 66 498 - -
Vifa4g00722 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Vifa4g00722 510 Gene3D Cytochrome P450 31 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00722 510 Pfam Cytochrome P450 47 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00722 Vifa-Chr4 210491719 210493729 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00722 14 505 Cytochrome P450 AT2G45510 60.976 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00722 - - gmx:100792128 714.916