Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00711 ATGCTATGCAAGTATCCTACAGTACAAGAAAAGGTTGCAGAAGAAGTGAGAGAAGCGACAAACACAAAAACAATTAGTAGCTACACTGAGTTTGTTTCAAGGGTAACAGATGAAGCTATTGAAAAGATGAATTATCTCTATGCAGCACTCACAGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATTTGTTTTTCTGATGATACATTACCAGATGGATATAGTGTAAAAAAAGGAGACATGGTGTGTTACCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCCGAGGAGTTTAGACCAGAAAGATGGCTTGATGAGAATGGAGTTTTTCAGCCAGAAAGCCCTTTCAAGTTCACTGCTTTTCAGGCAGGTCCTCGGATATGCCTAGGAAAAGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCTGTTTTATTAGGTTGTTTTCGTTTCAAATTGAATGATGAGAAAAAAAATGTGACTTATAAGACAATGATAAATCTTCATATTGATGGAGGTCTTGAAATCAAAGCATTACACAGGGATTAG 573 0.377 MLCKYPTVQEKVAEEVREATNTKTISSYTEFVSRVTDEAIEKMNYLYAALTETLRLYPAVPVDAKICFSDDTLPDGYSVKKGDMVCYQPYAMGRMKFIWGDDAEEFRPERWLDENGVFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEIKALHRD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00711 190 PRINTS E-class P450 group IV signature 94 112 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS E-class P450 group IV signature 77 91 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS E-class P450 group IV signature 43 59 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS E-class P450 group IV signature 136 154 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 Pfam Cytochrome P450 2 172 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PANTHER CYTOCHROME P450 1 182 - -
Vifa4g00711 190 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS P450 superfamily signature 48 59 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS P450 superfamily signature 4 17 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS P450 superfamily signature 136 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 PRINTS P450 superfamily signature 127 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00711 190 SUPERFAMILY Cytochrome P450 2 189 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00711 Vifa-Chr4 207300129 207300960 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00711 1 189 Cytochrome P450 AT2G45510 58.947 1.65e-78 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00711 - - gmx:100789929 357.451