Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00694 ATGAACATCATTTTAGAAACAATTGAACGATACCGCAGTCATACCAGGATTAATACTCCAACAACATCTGAATCACTTGAATATACTCAGCGTTTGAAGGAAGAAGCAGAAAACATGATGAAAAAGATTGATCTTCTCGAGACTTCAAAACGATATTTTTTAGGAGAAGGTTTAGGGACTTGTTCCATTGATGAACTACAAAGGATAGAGCAACAGTTGGAGAGCAGTATAACCAATATTCGAGTTAAAAAGAACGAGGTTTTCAGAGAACAAATTGAACAGCTAACAGAAAAGGAAAAAACCCTAGTTGCTGAAAATACCAGGCTCTCTGAGAAGTATGATAGTTATTCATCACAGCAAGCAAAAGATGATGATAGAGAAAATGCAGATCAAAGTAGTCCAATTTCAGATGTAGAGACTGAGTTATTCATTGGTCATCGAGAAACAAGAACAAGGCGCATTTCTCCGAAATTGAGGACTAATTAA 486 0.3601 MNIILETIERYRSHTRINTPTTSESLEYTQRLKEEAENMMKKIDLLETSKRYFLGEGLGTCSIDELQRIEQQLESSITNIRVKKNEVFREQIEQLTEKEKTLVAENTRLSEKYDSYSSQQAKDDDRENADQSSPISDVETELFIGHRETRTRRISPKLRTN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00694 161 Coils Coil 29 49 - -
Vifa4g00694 161 Coils Coil 63 112 - -
Vifa4g00694 161 ProSiteProfiles K-box domain profile. 29 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vifa4g00694 161 MobiDBLite consensus disorder prediction 141 155 - -
Vifa4g00694 161 MobiDBLite consensus disorder prediction 111 161 - -
Vifa4g00694 161 MobiDBLite consensus disorder prediction 117 132 - -
Vifa4g00694 161 Pfam K-box region 29 113 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00694 Vifa-Chr4 201021194 201022600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00694 6 100 MADS-box Gene Family AT2G45660 60.000 2.72e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00694 - - psat:127075834 241.891