Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa4g00685 | ATGTCAATGCTAAACATGTTTTTTCAGAAACTTATCAACTCATATTCTCTTCTTTGGCTTCCAATACTGCTGATCCCTCTAAGCAATGTTTCAGTTTATGGTGTTGAACAAAAGAACTTCTACATTGTCTTCCTAGAAGCTCGACCTGTTAGTAGAGAAAAAGCAGTAGAGACTCATTTAAATATTCTCTCCGCTGTTAAACAAAGCAGTCATGTTGAAGCCAAAGAATCCATAGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAACTCTCTGAGGATGAAGCCAACAAGTTATCTGCCATGAATGAAGTGTTCTCAGTATTTCCAAATCAATACCGCAAGCTACACACAACAAGGTCGTGGAGTTTTCTTGGATTACCTTTGACAGCTAAGAGAAAACCGAAGTCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGATGATGGATTTGGCCCTCCACCTGCTAAATGGAAAGGAACTTGTCACAAATTTGTTAACTTTTCGGGCTGCAATAACAAGATCATTGGAGCCAGATACTTCAAGCTTGACGGAAGGCCCGATCCATCTGATATATTATCTCCCATAGACGTGGAAGGGCATGGAACTCATACTGCATCAACAGCCGGAGGAAATCTTGTTCCAAATGCAAGTCTCTTCGGATTAGCCAAAGGGACGGCTCGCGGGGCGGTGCCTTCAGCCAGGTTGGCAATTTACAAAGTGTGCTGGACAGAAGATGGATGTTCTGATATGGACATACTTGCTGCGTTTGAGGCTGCCATACATGACGGCGTGGATGTCATATCGGTTTCATTAGGTGGAGGAAATGCAAATTATGTGCAGGACTGTATAGCTATTGGTGCATTTCATGCCATGAGGAAAGGCATAATCACGGTCGCCTCAGCTGGAAATGGTGGCCCAACTATGGCAACTGTCGTAAATAATGCGCCGTGGATTGTCACAGTAGCTGCTAGTGGCATTGATAGGGACTTCCAGAGCATTATAGAGATGGGAAGTAGAAAAAATGTTTCAGGAGAAGGAGTAAGCACTTTCAGTCCAAAACAAAAGCAATACCCTCTTGTTAATGGAATGGACGCAGCGCGAGACTCATCAAGCAAGGAAAATGCTAAGTTCTGTGATGATGCCGATTCCTTAGATCCAAAAAAAGTGAAAGGAAAGATCGTTTACTGCCGATTTAGAACATGGGGCACTGATGCTGTAGTGAAAGCAATTGGAGGCGTTGGTACTATAGTTGAAAATGATCAATTTCTAGATGTTGCTCAAATATTCAGTGCTCCTGCCACCTTTGTGAATCAAAGCACAGGTCAAATTGTTACCAATTATATACAATCTACAAGATCACCTTCAGCAGTGATACATAAAAGCCATGAAGTGAAAATACCAGCTCCATTTGTCGCGTCTTTTTCATCAAGGGGTCCAAATCCAGGATCTCAGCATGTCCTCAAGCCTGATATAACAGCTCCTGGCATTAACATCTTGGCAGCATATACACTTAAGACTTCGATTACTGGTTTAGAAGGGGACACTCAATTTTCCGAGTTTACACTAATGTCCGGTACTTCCATGTCATGCCCTCATGTTTCCGGAGTAGCAGCATATGTGAAGTCATTTCACCCGGATTGGACTCCTGCTGCAATAAGATCAGCTATAATTACCACAGCTAAACCTATGAGCCAGAAAGTTAACATGGAAGCCGAGTTTGCATTTGGTGCTGGTCAAGTTAATCCAACAAAAGCTCTGAATCCTGGTTTAGTATATGACATGGATGACTTTGCTTATATTCAGTTCTTATGCCATGAAGGATACAATGGTTCCACATTATCAGTACTAACTGGTTCTCCTATAAACTGCACTTCTTTGCTTCCTGGGATTGGCCATGATGCTATCAATTATCCTAGCATGCAATTGAGTGTGAAAAGCAACACAGATAGAACAATAGGAGTTTTCAGGAGAAGAGTTACCAATGTAGGCCCGGGACCAACCATCTACAACGCCACCGTTAAATCTCCAAAAGGAGTTGAAATCATAGTGAAGCCTACTAGTCTCATCTTCTCTCACACCCTGCAAAAGAAGAGCTTTAAGGTAGTGGTGAAAGCAAAGTCTATGGCAAGCATGAAAATTATATCAGGTTCGCTTATTTGGAGAAGCCCTCGTTACATTGTTAGAAGCCCTATTGTTATCTACAGTGCATAA | 2253 | 0.4217 | MSMLNMFFQKLINSYSLLWLPILLIPLSNVSVYGVEQKNFYIVFLEARPVSREKAVETHLNILSAVKQSSHVEAKESIVYSYTKSFNAFAAKLSEDEANKLSAMNEVFSVFPNQYRKLHTTRSWSFLGLPLTAKRKPKSESDTIVALLDTGITPEFQSFKDDGFGPPPAKWKGTCHKFVNFSGCNNKIIGARYFKLDGRPDPSDILSPIDVEGHGTHTASTAGGNLVPNASLFGLAKGTARGAVPSARLAIYKVCWTEDGCSDMDILAAFEAAIHDGVDVISVSLGGGNANYVQDCIAIGAFHAMRKGIITVASAGNGGPTMATVVNNAPWIVTVAASGIDRDFQSIIEMGSRKNVSGEGVSTFSPKQKQYPLVNGMDAARDSSSKENAKFCDDADSLDPKKVKGKIVYCRFRTWGTDAVVKAIGGVGTIVENDQFLDVAQIFSAPATFVNQSTGQIVTNYIQSTRSPSAVIHKSHEVKIPAPFVASFSSRGPNPGSQHVLKPDITAPGINILAAYTLKTSITGLEGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSQKVNMEAEFAFGAGQVNPTKALNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLTGSPINCTSLLPGIGHDAINYPSMQLSVKSNTDRTIGVFRRRVTNVGPGPTIYNATVKSPKGVEIIVKPTSLIFSHTLQKKSFKVVVKAKSMASMKIISGSLIWRSPRYIVRSPIVIYSA | 750 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa4g00685 | 750 | Pfam | Subtilase family | 141 | 592 | IPR000209 | GO:0006508|GO:0008236 | |
| Vifa4g00685 | 750 | Gene3D | Peptidase S8/S53 domain | 142 | 610 | IPR036852 | GO:0004252|GO:0006508 | |
| Vifa4g00685 | 750 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 30 | 119 | IPR037045 | - | |
| Vifa4g00685 | 750 | Gene3D | - | 617 | 749 | - | - | |
| Vifa4g00685 | 750 | CDD | Peptidases_S8_3 | 117 | 574 | IPR034197 | - | |
| Vifa4g00685 | 750 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 123 | 600 | - | - | |
| Vifa4g00685 | 750 | FunFam | Subtilisin-like protease SBT1.5 | 142 | 366 | - | - | |
| Vifa4g00685 | 750 | Pfam | Peptidase inhibitor I9 | 41 | 119 | IPR010259 | - | |
| Vifa4g00685 | 750 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 71 | 746 | IPR045051 | - | |
| Vifa4g00685 | 750 | CDD | PA_subtilisin_like | 348 | 472 | - | - | |
| Vifa4g00685 | 750 | Gene3D | - | 341 | 478 | - | - | |
| Vifa4g00685 | 750 | Pfam | Fibronectin type-III domain | 649 | 747 | IPR041469 | - | |
| Vifa4g00685 | 750 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 539 | 549 | IPR023828 | - | |
| Vifa4g00685 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 210 | 223 | IPR015500 | - | |
| Vifa4g00685 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 140 | 159 | IPR015500 | - | |
| Vifa4g00685 | 750 | PRINTS | Subtilisin serine protease family (S8) signature | 538 | 554 | IPR015500 | - | |
| Vifa4g00685 | 750 | SUPERFAMILY | Subtilisin-like | 118 | 604 | IPR036852 | GO:0004252|GO:0006508 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa4g00685 | Vifa-Chr4 | 196539522 | 196543073 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifa4g00685 | 38 | 588 | Subtilisin-like Serine Gene Family | AT4G00230 | 64.247 | 0.0 | 723 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa4g00685 | - | - | ccaj:109800351 | 1232.24 |