Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00684 ATGTCAATGCTAAACATGTTTTTTCAGAAACTTATCAACTCATATTCTCTTCTTTGGCTTCCAATACTGCTGATCCCTCTAAGCAATGTTTCAGTTTATGGTGTTGAACAAAAGAACTTCTACATTGTCTTCCTAGAAGCTCGACCTGTTAGTAGAGAAAAAGCAGTAGAGACTCATTTAAATATTCTCTCCGCTGTTAAACAAAGTCATGTTGAAGCCAAAGAATCCATAGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAACTCTCTGAGGATGAAGCCAACAAGTTATCTGCCATGAATGAAGTGTTCTCAGTATTTCCAAATCAATACCGCAAGCTACACACAACAAGGTCGTGGAGTTTTCTTGGATTACCTTTGACAGCTAAGAGAAAACCGAAGTCAGAGAGTGACACAATTGTGGCTCTTTTGGATACAGGGATCACTCCTGAGTTTCAAAGCTTCAAGGATGATGGATTTGGCCCTCCACCTGCTAAATGGAAAGGAACTTGTCACAAATTTGTTAACTTTTCGGGCTGCAATAACAAGATCATTGGAGCCAGATACTTCAAGCTTGACGGAAGGCCCGATCCATCTGATATATTATCTCCCATAGACGTGGAAGGGCATGGAACTCATACTGCATCAACAGCCGGAGGAAATCTTGTTCCAAATGCAAGTCTCTTCGGATTAGCCAAAGGGACGGCTCGCGGGGCGGTGCCTTCAGCCAGGTTGGCAATTTACAAAGTGTGCTGGACAGAAGATGGATGTTCTGATATGGACATACTTGCTGCGTTTGAGGCTGCCATACATGACGGCGTGGATGTCATATCGGTTTCATTAGGTGGAGGAAATGCAAATTATGTGCAGGACTGTATAGCTATTGGTGCATTTCATGCCATGAGGAAAGGCATAATCACGGTCGCCTCAGCTGGAAATGGTGGCCCAACTATGGCAACTGTCGTAAATAATGCGCCGTGGATTGTCACAGTAGCTGCTAGTGGCATTGATAGGGACTTCCAGAGCATTATAGAGATGGGAAGTAGAAAAAATGTTTCAGGAGAAGGAGTAAGCACTTTCAGTCCAAAACAAAAGCAATACCCTCTTGTTAATGGAATGGACGCAGCGCGAGACTCATCAAGCAAGGAAAATGCTAAGTTCTGTGATGATGCCGATTCCTTAGATCCAAAAAAAGTGAAAGGAAAGATCGTTTACTGCCGATTTAGAACATGGGGCACTGATGCTGTAGTGAAAGCAATTGGAGGCGTTGGTACTATAGTTGAAAATGATCAATTTCTAGATGTTGCTCAAATATTCAGTGCTCCTGCCACCTTTGTGAATCAAAGCACAGGTCAAATTGTTACCAATTATATACAATCTACAAGATCACCTTCAGCAGTGATACATAAAAGCCATGAAGTGAAAATACCAGCTCCATTTGTCGCGTCTTTTTCATCAAGGGGTCCAAATCCAGGATCTCAGCATGTCCTCAAGCCTGATATAACAGCTCCTGGCATTAACATCTTGGCAGCATATACACTTAAGACTTCGATTACTGGTTTAGAAGGGGACACTCAATTTTCCGAGTTTACACTAATGTCCGGTACTTCCATGTCATGCCCTCATGTTTCCGGAGTAGCAGCATATGTGAAGTCATTTCACCCGGATTGGACTCCTGCTGCAATAAGATCAGCTATAATTACCACAGCTAAACCTATGAGCCAGAAAGTTAACATGGAAGCCGAGTTTGCATTTGGTGCTGGTCAAGTTAATCCAACAAAAGCTCTGAATCCTGGTTTAGTATATGACATGGATGACTTTGCTTATATTCAGTTCTTATGCCATGAAGGATACAATGGTTCCACATTATCAGTACTAACTGGTTCTCCTATAAACTGCACTTCTTTGCTTCCTGGGATTGGCCATGATGCTATCAATTATCCTAGCATGCAATTGAGTGTGAAAAGCAACACAGATAGAACAATAGGAGTTTTCAGGAGAAGAGTTACCAATGTAGGCCCGGGACCAACCATCTACAACGCCACCGTTAAATCTCCAAAAGGAGTTGAAATCATAGTGAAGCCTACTAGTCTCATCTTCTCTCACACCCTGCAAAAGAAGAGCTTTAAGGTAGTGGTGAAAGCAAAGTCTATGGCAAGCATGAAAATTATATCAGGTTCGCTTATTTGGAGAAGCCCTCGTTACATTGTTAGAAGCCCTATTGTTATCTACAGTGCATAA 2250 0.4213 MSMLNMFFQKLINSYSLLWLPILLIPLSNVSVYGVEQKNFYIVFLEARPVSREKAVETHLNILSAVKQSHVEAKESIVYSYTKSFNAFAAKLSEDEANKLSAMNEVFSVFPNQYRKLHTTRSWSFLGLPLTAKRKPKSESDTIVALLDTGITPEFQSFKDDGFGPPPAKWKGTCHKFVNFSGCNNKIIGARYFKLDGRPDPSDILSPIDVEGHGTHTASTAGGNLVPNASLFGLAKGTARGAVPSARLAIYKVCWTEDGCSDMDILAAFEAAIHDGVDVISVSLGGGNANYVQDCIAIGAFHAMRKGIITVASAGNGGPTMATVVNNAPWIVTVAASGIDRDFQSIIEMGSRKNVSGEGVSTFSPKQKQYPLVNGMDAARDSSSKENAKFCDDADSLDPKKVKGKIVYCRFRTWGTDAVVKAIGGVGTIVENDQFLDVAQIFSAPATFVNQSTGQIVTNYIQSTRSPSAVIHKSHEVKIPAPFVASFSSRGPNPGSQHVLKPDITAPGINILAAYTLKTSITGLEGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSQKVNMEAEFAFGAGQVNPTKALNPGLVYDMDDFAYIQFLCHEGYNGSTLSVLTGSPINCTSLLPGIGHDAINYPSMQLSVKSNTDRTIGVFRRRVTNVGPGPTIYNATVKSPKGVEIIVKPTSLIFSHTLQKKSFKVVVKAKSMASMKIISGSLIWRSPRYIVRSPIVIYSA 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00684 749 Gene3D - 340 477 - -
Vifa4g00684 749 CDD PA_subtilisin_like 347 471 - -
Vifa4g00684 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 70 745 IPR045051 -
Vifa4g00684 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 538 548 IPR023828 -
Vifa4g00684 749 Pfam Subtilase family 140 591 IPR000209 GO:0006508|GO:0008236
Vifa4g00684 749 Gene3D Peptidase S8/S53 domain 141 609 IPR036852 GO:0004252|GO:0006508
Vifa4g00684 749 ProSiteProfiles Serine proteases, subtilase domain profile. 122 599 - -
Vifa4g00684 749 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Vifa4g00684 749 PRINTS Subtilisin serine protease family (S8) signature 537 553 IPR015500 -
Vifa4g00684 749 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vifa4g00684 749 Pfam Peptidase inhibitor I9 41 118 IPR010259 -
Vifa4g00684 749 CDD Peptidases_S8_3 116 573 IPR034197 -
Vifa4g00684 749 FunFam Subtilisin-like protease SBT1.5 141 365 - -
Vifa4g00684 749 FunFam Subtilisin-like protease SBT5.3 31 118 - -
Vifa4g00684 749 Gene3D - 616 748 - -
Vifa4g00684 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 30 118 IPR037045 -
Vifa4g00684 749 Pfam Fibronectin type-III domain 648 746 IPR041469 -
Vifa4g00684 749 SUPERFAMILY Subtilisin-like 117 603 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00684 Vifa-Chr4 196539522 196543073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00684 38 587 Subtilisin-like Serine Gene Family AT4G00230 64.364 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00684 - - ccaj:109800351 1236.86