Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00661 ATGGAGGAGAATCATAGAAAGGCAATGGAGGAGATTATGAGAGGGTGTGAGTTTGCTAACCAGCTCCAACAATTACTGCTTAATGATAATAATACTAATGATTTGACACCAACAACTTCATTTGTTCAATATCTTGTCAACAACATCATCAATTCCTTTAGCAATGTTCTTTTTCTCATAGACAAACATGATTTTTCCTCTATTGCTCCCGGAGTTAGATCACTTGTCAACATGGAAAAAAGTTGCAAAACTACTTCTTCTCCTACCAGAGGACCTTACAAAAGAAGAAACACTATATTGGAGAAGGTGACAGAAACTCCCATAGATGATGATGGTCATCAATGGAGAAAGTATGGCCAGAAAAATATCAACAATTCTCAATACCCAAGGAACTACTACAGGTGTACTCACAAGTATGATCAAAGATGCCTAACAACCAAACAGGTGGAGAGAATTCAACAAAAACCTCCCTTATATAAAGCCACCTATTATGGCCACCACACTTGTGGTAACATGCCCAACCATCACATCATACATGGCCCTAATGACACTAATTCCTCCATATTGCTTAGCTTTAACAACACATTCTCAGTTCCAACAAACCAAGAATCTTCATCTTCCTCACATGATTTAGTGAATAAGGACATGTTCTCCACTCATACAGCTTTTGATAGTTCTAACTATACAAGCCATGTTCCTACTCTATCATCAACACTTGAAACTGATCACAAGAGTATGATGCAGTATGGTTTCTTGTATGATTTCGTGGAGTTTGATGATGACTTCTTTCTCCCTTTTGATGGGTTTTGA 810 0.3765 MEENHRKAMEEIMRGCEFANQLQQLLLNDNNTNDLTPTTSFVQYLVNNIINSFSNVLFLIDKHDFSSIAPGVRSLVNMEKSCKTTSSPTRGPYKRRNTILEKVTETPIDDDGHQWRKYGQKNINNSQYPRNYYRCTHKYDQRCLTTKQVERIQQKPPLYKATYYGHHTCGNMPNHHIIHGPNDTNSSILLSFNNTFSVPTNQESSSSSHDLVNKDMFSTHTAFDSSNYTSHVPTLSSTLETDHKSMMQYGFLYDFVEFDDDFFLPFDGF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00661 269 Gene3D WRKY domain 95 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa4g00661 269 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 194 IPR044810 GO:0003700
Vifa4g00661 269 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa4g00661 269 SUPERFAMILY WRKY DNA-binding domain 104 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa4g00661 269 Pfam WRKY DNA -binding domain 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa4g00661 269 ProSiteProfiles WRKY domain profile. 104 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00661 Vifa-Chr4 189079294 189080309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00661 7 169 WRKY Transcription Factor Family AT3G56400 32.961 7.10e-27 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa4g00661 WRKY 8.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00661 - - mtr:25500948 274.633