Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00558 ATGTTATTGCAAAGCTTCCCATCAGGTGAGCAAGCTGTCAAAATGCTATCTTTCTCATCAGCTCAAGGATATCTACAATTTCAAGTAGAGGGAGGTCAAAAGCAAAGAGTTGCAATTGGAAGAGCAATTTTGAAAGATCCAAAAATATTACTTCTTGATGAAGCTACAAGTGCCCTTGATGCCGAGTGTGCATGTATTGATACTAACTTGTGCATTTGTATGTTCTTTTTAAACCTTGGTGATTTCCTTGTGCAGAAACTAGGGGAAGGTGTGAAAGGGGTGTATATCTCGATAGACGTGGATTGTCTTGATCCTGCATTTGCTCCGGGAGTGTCTCATATTGAACCGGGAGGTCTTTCTTTCCGCGATGTTCTTAACATCCTACACAATCTTCAAGGTGATGTTGTTGCTGGAGACGTCGTTGAACTCAACCCACAACGCGATACTGTTGATGGAATGACTGCTATGGTAGCTGCTAAGTTGGTCAGAGAAATGGCTGCAAAGATTGCAAAATGA 516 0.4186 MLLQSFPSGEQAVKMLSFSSAQGYLQFQVEGGQKQRVAIGRAILKDPKILLLDEATSALDAECACIDTNLCICMFFLNLGDFLVQKLGEGVKGVYISIDVDCLDPAFAPGVSHIEPGGLSFRDVLNILHNLQGDVVAGDVVELNPQRDTVDGMTAMVAAKLVREMAAKIAK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00558 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 63 IPR027417 -
Vifa4g00558 171 ProSitePatterns Arginase family signature. 97 118 IPR020855 GO:0016813|GO:0046872
Vifa4g00558 171 ProSiteProfiles Arginase family profile. 81 171 IPR006035 GO:0046872
Vifa4g00558 171 SUPERFAMILY Arginase/deacetylase 81 167 IPR023696 -
Vifa4g00558 171 Gene3D - 28 63 IPR027417 -
Vifa4g00558 171 Gene3D Ureohydrolase domain 74 171 - -
Vifa4g00558 171 Pfam Arginase family 85 165 IPR006035 GO:0046872
Vifa4g00558 171 PANTHER ARGINASE/AGMATINASE 84 171 IPR006035 GO:0046872
Vifa4g00558 171 Pfam ABC transporter 27 57 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00558 Vifa-Chr4 160141167 160142698 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00558 18 63 Calmodulin-binding Proteins AT2G36910 63.043 1.12e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00558 K01476 - gmx:100789799 169.474