Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00516 ATGGAGTTACTTCTTTTCCTCTTTTTAGCTTCTCTTCTTATCTGCAATACAATAATTGCAGATCAAAATACTAAGCCTTATGTTGTTTATATGGGAAATCCAATTTCATCACCAAACAACATTGATGTAGATGAAGAAATACCTGAATCATTTCATCTTCAGTTACTATCATCAATCATTCCAAGTGAAGAAAGTGAGAGGATAAAACTTATCCACCATTACAGTCATGCTTTTAGTGGATTTTCTGCCATGCTTACTGAGAATGAAGCTTCTGCATTGTCTGGACACGATGGTGTGGTGTCGTTGTTCCCAGATCCAATTTTAGAATTGCATACAACAAGATCTTGGGATTTTTTAGATTCAGATTTGGGAATGAAACCTCCTCTCATTACTCCCAAACATTCATCAAATGATGTAATCATTGCTCTCATTGACACAGGAATATGGCCAGAGTCACCAAGTTTTAGAGATGAGGGTATAGGCAAGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAAGGCCTTGATTTCAAGAAATCTAATTGCAACAGAAAACTGATAGGTGCGAGATACTATAATACACAAGATATATCAAATAGCAACAAAACTCATATTGAAGGAGCCAAAGGTTCACCAAGAGATTCTGTTGGACATGGAACTCACACTGCGTCAACAGCAGCGGGTGTATTTGTAAACAATGCTACTTATTATGGTTTAGCAAAAGGAACAGCGAGAGGTGGTTCACCTTCTACTAGAATTGCAGCCTATAAAACATGTTCAGAAGAAGGTTGTTCAGGTTCGACGATACTAAAGGCTATGGACGATGCAATCAGGGATGGAGTGGATATAATCTCGATCTCTGTCGGACTTAGTTCGCTAATGCAGTCTGATTATTTGAATGATCCAATAGCTATTGGAGCATTTCATGCTGAACAAAGGGGGGTTATGGTGGTGTGTTCAGCGGGGAATGATGGTCCTGATCCTTATACTGTTGTGAATACAGCACCATGGATATTTACAGTTTCGGCTTCTAATATTGATAGGAACTTTCGGTCAACCGTTGTCCTTGGAAATGGAAAAACTTTCCAAGGTGCTGGCATTAACTTCTCAAACCTTACTCGCTCAACAATGCACTCTCTTGTCTTTGGAGAGGAAATTGCGGCCAAATTTGCGCCAACATCAGAAGCTAAGAATTGTTATCCTGGATCACTAGATTATACCAAAGTAGCAGGAAAAATTGTTGTTTGTGTTAACGATGATCCAAATATTTCAAGGCGCGTCAAGAAGCTAGTTTTACAAGATGCAAGAGCCACGGGGATGATACTAGTCGACGAGAACAATAGAGATGTTTCCTTTGATGCAGGTGCATTTCCTTTCACAGAGATTGGAAATCTTGAATGGCATCAGATCCTTCAGTACATAAACTCTACCAAGAATCCAACTGCAACAATTCTTCCAACAACCGAAGTTCCTAGATATAGGCCTGCACCAATTGTTGCATCCTTTTCATCCAGAGGTCCTTCTAGCCTTACAGAAAACATTCTCAAGCCTGATGTCATGGCTCCAGGAGTTGCCATTTTGGCTGCCATGGTTCCCAAAAGTGATGAGCCGGGAAGTGTTCCAATTGGTGAAAAGCCGTCCTTATTTGGCATAAAATCCGGTACATCTATGGCATGCCCGCATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTAATGACAACAGCTACAACCTACAATAACATGAAGAAGCCGGTGACCAACAGCTCAAACTACATTGCCAACCCACACGAAATGGGAGTTGGAGAAATCAATCCACTCAAAGCTCTCAACCCTGGTTTAGTCTTCGAAACAAATGTACAAGACTACATCAGATTCCTTTGTTATTATGGCTACTCAAAGAAAATCATAAGCTCATTATCTAAAACCAATGTAACTTGCCCAAAAACCTCACAAGATCTTATATCCAACATCAACTACCCATCAATCTCTATACAAACACTCAAAAGAAATCAAAAAGTAAAAGTGATCACAAGAACAGTCACCAATGTGGGAAATTTTAATGCTACATATGTTGCAAAGGTGCATGCACCTGAAGGAATGGTTGTTAATGTCTTCCCAAACAAACTTGTGTTTTCAGAGAATGTTGAAAGAATTACATATAAAGTCTCATTCTATGCCAGAGAAGCTCGTGGTGGATACAATTTTGGGTCTATAACATGGCTTGATGGTCGACACTATGTTCATACAGTATTTGCAGTCAAAGTTGAATAA 2313 0.396 MELLLFLFLASLLICNTIIADQNTKPYVVYMGNPISSPNNIDVDEEIPESFHLQLLSSIIPSEESERIKLIHHYSHAFSGFSAMLTENEASALSGHDGVVSLFPDPILELHTTRSWDFLDSDLGMKPPLITPKHSSNDVIIALIDTGIWPESPSFRDEGIGKIPSRWKGVCMEGLDFKKSNCNRKLIGARYYNTQDISNSNKTHIEGAKGSPRDSVGHGTHTASTAAGVFVNNATYYGLAKGTARGGSPSTRIAAYKTCSEEGCSGSTILKAMDDAIRDGVDIISISVGLSSLMQSDYLNDPIAIGAFHAEQRGVMVVCSAGNDGPDPYTVVNTAPWIFTVSASNIDRNFRSTVVLGNGKTFQGAGINFSNLTRSTMHSLVFGEEIAAKFAPTSEAKNCYPGSLDYTKVAGKIVVCVNDDPNISRRVKKLVLQDARATGMILVDENNRDVSFDAGAFPFTEIGNLEWHQILQYINSTKNPTATILPTTEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGVAILAAMVPKSDEPGSVPIGEKPSLFGIKSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTATTYNNMKKPVTNSSNYIANPHEMGVGEINPLKALNPGLVFETNVQDYIRFLCYYGYSKKIISSLSKTNVTCPKTSQDLISNINYPSISIQTLKRNQKVKVITRTVTNVGNFNATYVAKVHAPEGMVVNVFPNKLVFSENVERITYKVSFYAREARGGYNFGSITWLDGRHYVHTVFAVKVE 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00516 770 Pfam Fibronectin type-III domain 670 767 IPR041469 -
Vifa4g00516 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 111 IPR037045 -
Vifa4g00516 770 ProSiteProfiles Serine proteases, subtilase domain profile. 115 623 - -
Vifa4g00516 770 Pfam Peptidase inhibitor I9 27 111 IPR010259 -
Vifa4g00516 770 FunFam Subtilisin-like protease SBT1.5 138 368 - -
Vifa4g00516 770 Gene3D Peptidase S8/S53 domain 138 636 IPR036852 GO:0004252|GO:0006508
Vifa4g00516 770 Gene3D - 640 769 - -
Vifa4g00516 770 CDD PA_subtilisin_like 353 484 - -
Vifa4g00516 770 FunFam subtilisin-like protease SBT1.5 347 490 - -
Vifa4g00516 770 Gene3D - 347 491 - -
Vifa4g00516 770 CDD Peptidases_S8_3 108 590 IPR034197 -
Vifa4g00516 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Vifa4g00516 770 Pfam Subtilase family 137 594 IPR000209 GO:0006508|GO:0008236
Vifa4g00516 770 SUPERFAMILY Subtilisin-like 110 627 IPR036852 GO:0004252|GO:0006508
Vifa4g00516 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 763 IPR045051 -
Vifa4g00516 770 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Vifa4g00516 770 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Vifa4g00516 770 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00516 Vifa-Chr4 142290639 142312276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00516 27 767 Subtilisin-like Serine Gene Family AT1G20150 43.438 0.0 590