Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00501 ATGTGTTGTTCTGTGAAAGCAACTGCATCTCCAATATTCACCTTTGCAAACCAAGCTGGACCAGACATGCTTGAAACAACTCTAGTTGCACTTCAGGATATAATGCTGGATAAAGTACTTGATGAAGCTGGCAGAAAGATTCTTTGCTCTGAATTCTCCAAGATAATGCAACAGGGTTACACTTATCTGCCATCAGGGATATGTGTATCAAGCATGAATAGGCTAGTTTCTTATGAGCAAGACAGTGCATGGAAAGTTCTTAATGATAATGATGCCAATCACTGTCTAGCATTCATGTTCATCAACCGGTCCTTTGTCTGA 321 0.4019 MCCSVKATASPIFTFANQAGPDMLETTLVALQDIMLDKVLDEAGRKILCSEFSKIMQQGYTYLPSGICVSSMNRLVSYEQDSAWKVLNDNDANHCLAFMFINRSFV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00501 106 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 106 IPR044830 GO:0003700
Vifa4g00501 106 Pfam MEKHLA domain 1 104 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00501 Vifa-Chr4 138880551 138881077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00501 1 106 Homeobox Transcription Factor Family AT2G34710 74.528 3.09e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00501 K09338 - tcc:18595045 187.963