Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00443 ATGATATTGTTGCAGGTTAAGCAGGATGGATTCTTTCCTGCAGATTTACTTTTCTTGGCCAGTACAAATGCATATGGTGTCTGCTACATTGAGACTGCTAATTTGGACGGGGAGACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACCTGGGATTACCTGACCCCAGAGAAGGCATCCGAGTTTAAAGGTGAAATTCAATGTGAACAACCGAACAATTCCTTGTATACATTTACCGGAAATCTTTTGATTCAAAAGCAGACACTTCCACTGCCCAAACCAGATTCTTTTGCGAATTACTTGAGTGTTTTTTCTTTGGGATGCAGTCTCAGAAATACAGAGTATATTGTTGGTGTTGTTATTTTTACAGGACAAGAAACAAAGTTAAACAGTATTTTGTTACTACTTTCTAATAGTTTTTTATTGTTGTTTTTTCAAGAGGACGACGTAGATGACGAATTTCAAGAGGACGACATAGATCTAGATGATGAATTTCAAGAGGAGGATATAGATGGTGAATTTCAAGAGGACGACGTAGATGAAGAATTTATGGAGGATGACATATCTAACGAATTTCAAGAGGACGATCTGGATGCTTTACTCCTAGAAGACAAACTTAAATGA 624 0.3718 MILLQVKQDGFFPADLLFLASTNAYGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLPKPDSFANYLSVFSLGCSLRNTEYIVGVVIFTGQETKLNSILLLLSNSFLLLFFQEDDVDDEFQEDDIDLDDEFQEEDIDGEFQEDDVDEEFMEDDISNEFQEDDLDALLLEDKLK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00443 207 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 129 - -
Vifa4g00443 207 Gene3D - 3 137 - -
Vifa4g00443 207 SUPERFAMILY Calcium ATPase, transduction domain A 4 133 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00443 Vifa-Chr4 120621812 120623989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00443 3 129 Primary Pumps ATPases AT1G59820 73.228 1.54e-60 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00443 K14802 - gmx:100787473 205.297