Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00432 ATGGACTTATTACTATATTCCACACTCTCCTACGTAGCCATTTTTACATTCTCTTTCCTTCTCCTTCTCAAATTTCTCATTCCAACTGACCAAACCCAACCAACCAAAAAAAACCACTCCAAACTCCCACCAGGTCCTTCACCACTTCCCATAATAGGAAACCTTCTAAAACTAGGAAACAAACCACACCATTCCTTAGCAAACCTTTCCAACATCCATGGACCAATAATGACACTGAAACTAGGACAAATAACGACCATAGTTTATATCCTCAGCAGACATGGCCAAAAGAAGTTCTACAAACACATGATAACTTACTATCCAAACCGAACCGTCCCTGACGCACTCTCGTCCTCAACCCACGATCAATATAGTCTCTCTTTTATGCGGGTTTCGCCTCGCTGGCGGAGATTTGTTGGGGAACGGTTGAAGTTGAGAGAAGGTAGTGGTTCTATTGGAAATGATGATGTGCTTGATGCTTTGCTTAATATTTCTTTGGAGGATGGGAAAATTGAGATGGATAAAGATGAGATTGAACATTTGTTGCTGGAACATATTTGTTGCAGGAACAGACACACAAGCACGTACACACTAGAATGGGCAATGGCAGAGTTAATGCACAATCCAGAAATCATGTCAAAAATACAAAATGAACTCGAACAAGTTGTTGGCAAAGGTATTCCAGTCGAAGAAACAGACATAGCCAAATTACCATACATGCAAGCAGTTATAAAAGAGGACGTTTCGTGTACATCACCAGTTCCTTTATTACTACCTCGCAAAGCAGAAACAAATGTTGAAATTGGTGACTACATTATTCCAAAAGATGCACAAGTTTTGGTTAATGCTTGGGTTATTGGCAGAGATCCAAGTAAAATGGGAGAATCCTAA 891 0.4018 MDLLLYSTLSYVAIFTFSFLLLLKFLIPTDQTQPTKKNHSKLPPGPSPLPIIGNLLKLGNKPHHSLANLSNIHGPIMTLKLGQITTIVYILSRHGQKKFYKHMITYYPNRTVPDALSSSTHDQYSLSFMRVSPRWRRFVGERLKLREGSGSIGNDDVLDALLNISLEDGKIEMDKDEIEHLLLEHICCRNRHTSTYTLEWAMAELMHNPEIMSKIQNELEQVVGKGIPVEETDIAKLPYMQAVIKEDVSCTSPVPLLLPRKAETNVEIGDYIIPKDAQVLVNAWVIGRDPSKMGES 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00432 296 SUPERFAMILY Cytochrome P450 40 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 Gene3D Cytochrome P450 32 295 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 PRINTS E-class P450 group I signature 241 259 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 PRINTS E-class P450 group I signature 198 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 19 137 - -
Vifa4g00432 296 Pfam Cytochrome P450 154 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00432 296 Pfam Cytochrome P450 43 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00432 Vifa-Chr4 117495484 117496830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00432 149 291 Cytochrome P450 AT2G45550 50.350 1.30e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00432 - K25522 cave:132176057 186.808