Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00413 ATGGAGGAGAGTGGTGGTGATTTTCCTGCTGCTGAAGATTTGGTAGTGGACCACGTCCACGTCGACAAGGGCAAAAACGAAAATAACCCTTCTTTGGCCAAACATGTCCTGCTCTCCTCAGCCACGTCTGATTCACCTTATATCATAGGGGCTTCTGAGGAGTTTCCATTGGGTCGACTTTATGAAATTGATCATTCCAAACTTCCACAGAATTGCCCTTCTCAAATAAAATGTGTGAGCATTGTAATGGTCTGTGACAAAGGGGAGCAAGAAGTATCTCTGAGGTATCCAAGCCTTCACTCTCTTAGCACTCATTTCAACCACCAAAGCTTTGGAAAGCCGGGCGGGAAGAAAATCCCGACACTTGACGAGAAGTACGTGATGGGAATCGAATTCGCCATCAAAACACTTTGCAGAAGCATCTCAGCTGAGGAGTTTGCTCAGAAAAGAAACTCATGGAGCTTCTGGGCTTCTCCCACTGAAGAAACCTTTCTAAACCATAACAGTCCAGTTATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTCCATGTTGGTCTCAGCTCAAGTTCACGGGTATGGTGCAGTGGGGTCAACGCAGACAAGTTCGGTTCCTGGGCCGTCATGAGGAGCAAAAGGTTGAATCTTTACACCAACTTCATAAGGAAAAAAGTGCCATTTTTGAAAGGGAAAAGACTTATAAGAAGAGAAAGAGCGTTGAAGAAGAAATGGAGGCTGTAAAGGTAGCTCCTTTTGGGGTACTGAGGATGACTCGTCAGAGCTTCAAAAATCCACAAGATATGAGTAGTAGCAGCGGGGCTAAAAAGTCTAAGAAAGCAGAAAACGACACTAAGCAGCAGCAACTCGTTGTTTATAGGAAAAAAGGGCGGAAAATATCAATTGACAGATGGTCCGCTGAGAGGTATCACATGGCAGAGGAGAATATGTTGAAGGTTATGAAGGAAAGAGAAGCTGTGTATGGAAACCCAATAATGAGGCAAGACTTGAGATCAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCAGGAGGAGTTGAAAGATTCCGCCGACGTCACAATGCTGAAGGTTCAATGGAATACTGGTTAGAGAGTGCGAATCTCATTGATATCAGAAAGGAAATGGGTGTACAAGATCCTTACTGGACTCCTCCCCCAGGATGGAAGCCTGGAGACAGCATGTCACCAGATCATGTTACTAGGAATGAGCTCAGGGAGATAAGGGAGGAAATAATTAAGTTGAAACGAGATATGCTGGATCTCAAATCAAAAAAAGAAGAGGAAGCCTTGGCCATTGTGGCTACTTCTAGTCCTTGTTTGTCAAGTTTGAACTATAGGGACTATGATTCCCAGGTTGATAAGCAGCAGGAGATTTATGCTGAGCTGGTTCATAAAAAGGCTATAGTTGAAGAACAGCTAAAAGAAATTACTCTGACTTTGAATGGCATGGAGGGCCAACTTGGAATGCAGAAGCCAACAATGTCAGAACCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACAGAAAACATTGGAGAAGTGACAAGGGAGAATGACAAAGGAACAAAATCAGCGGACACACAAATGGTACGGAGCAGCGCAGCAGAGCAGAAGGCAGCAAAGATAGAAAGACTGAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGTACCTTTATGTGGCCAAATATGAGCTTGTCTCCTCATGTTGTGGCTAACCTTGATGAACTCACTGTGGTCCCAACCCCGTCCTCAGTTTCCTCTTCTACCACATCAGCTCCCAAGCTTGTCTCCAATTCCAAGACTGAGAACTTGCCACTATCCATACCTTCCCCTTCTTCTCCTGTTAAGCCACTAGCAGAGAGGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGACCCTTTTCCCCTCACCTTTCTCCTCCATTAGAGACCTCAAAATCCACAATCACCAAGAAGGATTCTTCTATTAACCTCAATGAGACTCCTCTGGCCCAAGAGTAG 2082 0.4481 MEESGGDFPAAEDLVVDHVHVDKGKNENNPSLAKHVLLSSATSDSPYIIGASEEFPLGRLYEIDHSKLPQNCPSQIKCVSIVMVCDKGEQEVSLRYPSLHSLSTHFNHQSFGKPGGKKIPTLDEKYVMGIEFAIKTLCRSISAEEFAQKRNSWSFWASPTEETFLNHNSPVINDAATSLVSKQGPCWSQLKFTGMVQWGQRRQVRFLGRHEEQKVESLHQLHKEKSAIFEREKTYKKRKSVEEEMEAVKVAPFGVLRMTRQSFKNPQDMSSSSGAKKSKKAENDTKQQQLVVYRKKGRKISIDRWSAERYHMAEENMLKVMKEREAVYGNPIMRQDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESANLIDIRKEMGVQDPYWTPPPGWKPGDSMSPDHVTRNELREIREEIIKLKRDMLDLKSKKEEEALAIVATSSPCLSSLNYRDYDSQVDKQQEIYAELVHKKAIVEEQLKEITLTLNGMEGQLGMQKPTMSEPLTPPALLLGPTSSLTENIGEVTRENDKGTKSADTQMVRSSAAEQKAAKIERLKSGFKICKPRGTFMWPNMSLSPHVVANLDELTVVPTPSSVSSSTTSAPKLVSNSKTENLPLSIPSPSSPVKPLAERRPVSTATLTHVTGPFSPHLSPPLETSKSTITKKDSSINLNETPLAQE 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00413 693 MobiDBLite consensus disorder prediction 605 693 - -
Vifa4g00413 693 MobiDBLite consensus disorder prediction 651 693 - -
Vifa4g00413 693 MobiDBLite consensus disorder prediction 605 634 - -
Vifa4g00413 693 PANTHER PROTEIN DYAD 54 675 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vifa4g00413 693 MobiDBLite consensus disorder prediction 261 289 - -
Vifa4g00413 693 Coils Coil 425 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00413 Vifa-Chr4 111058536 111062628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00413 300 390 PHD Transcription Factor Family AT5G22260 39.583 1.06e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00413 - - mtr:25502410 849.351