Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00392 ATGGCTTCAATTAGCAACCAACTTTGGTTGTTATTTCTCTCAGTTGTGCTTCTTCCTATTTTTGCATTTGCTATCCGTTCGACAATAGAAAATGGTGTACAACAAATAAATTTACATCCCAAAACAACTGTGCGCATTTACAATCAACTAGGAGGTTATGATGTTGATGTTCATTGCAAATCCAAAAATGATGATTTAGGGAATCAAGTGCTTCATGATAATCAACATTTTCAGTGGGATTTCCATCCTAATATTTGGGGTTCAACATTATTCTTTTGTCATATATCATGGACTAACGGTCAAGGAACATATGATATATACAAACAAAAAAGGGATTTTTCTAAAAGGTGTAGAAAATATTGTGACTGGTATGTTACAAAAGATGGAATACAAGGGTTCAAACAAGTGTTGGATAATGATGGGACACAACATGACTCAGAGCAAGACACATTTTTTAACTGGGAACCACGACCATAG 477 0.3459 MASISNQLWLLFLSVVLLPIFAFAIRSTIENGVQQINLHPKTTVRIYNQLGGYDVDVHCKSKNDDLGNQVLHDNQHFQWDFHPNIWGSTLFFCHISWTNGQGTYDIYKQKRDFSKRCRKYCDWYVTKDGIQGFKQVLDNDGTQHDSEQDTFFNWEPRP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00392 158 Pfam Plant self-incompatibility protein S1 43 135 IPR010264 -
Vifa4g00392 158 PANTHER - 39 131 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00392 Vifa-Chr4 104929471 104929947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00392 39 129 Carbohydrate Esterase AT3G16970 45.745 1.13e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00392 - - vun:114170110 126.331