Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa4g00375 | ATGGCAACTGAAGAGCATAATGTCGCGAAGGCTGAAGAATTTAAAGTCCTTGCTAACCAAGCATTCAAAGATCGGAAATTTTCCCACTCTATTGATCTATATACACAAGCAATTGAGCTAAACAGTCAAAGTGCAGTTTACTATGCTAATCGTGCCTTTGCCCACCTCCGGCTTGAGGAATACGGTAGCGCGATATTAGATGCTACAAAGGATATTGAAGTTGATCCTAAATATTCAAAGGGATATTACAGGCGAGGTGCTGCTCATCTTGGGTTGGGAAAATTCAAGGAAGCACTGAAAGATTTTCAGCAGGTCAAGAAAATGTGTCCAAATGATCCTGATGCAACAAAAAAATTGAAGGAATGTGAAAAATCAGTTATGAAACTGAAATTTGAAGAAGCTATTGCTGTACCAGGATCTGTGAAACACCAACAGCCGTCCTCAAACGCCGCCTCCATTGAAGGTCCTTCCGTCCAAACCGAAGCTTCGATCTCACGCATCATGGCCATCACCGATCTAATCGCAAAGCACTCTTTCGGTTCCATGTTCAACCTCCGCACTCAGTCGACCCTCTTCTTCCGTCGAACCACCACATAA | 597 | 0.4338 | MATEEHNVAKAEEFKVLANQAFKDRKFSHSIDLYTQAIELNSQSAVYYANRAFAHLRLEEYGSAILDATKDIEVDPKYSKGYYRRGAAHLGLGKFKEALKDFQQVKKMCPNDPDATKKLKECEKSVMKLKFEEAIAVPGSVKHQQPSSNAASIEGPSVQTEASISRIMAITDLIAKHSFGSMFNLRTQSTLFFRRTTT | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa4g00375 | 198 | Gene3D | Tetratricopeptide repeat domain | 2 | 159 | IPR011990 | GO:0005515 | |
Vifa4g00375 | 198 | SUPERFAMILY | TPR-like | 6 | 137 | IPR011990 | GO:0005515 | |
Vifa4g00375 | 198 | SMART | tpr_5 | 45 | 78 | IPR019734 | GO:0005515 | |
Vifa4g00375 | 198 | SMART | tpr_5 | 11 | 44 | IPR019734 | GO:0005515 | |
Vifa4g00375 | 198 | SMART | tpr_5 | 79 | 112 | IPR019734 | GO:0005515 | |
Vifa4g00375 | 198 | Pfam | Tetratricopeptide repeat | 80 | 112 | IPR001440 | GO:0005515 | |
Vifa4g00375 | 198 | PANTHER | RNA POLYMERASE II-ASSOCIATED PROTEIN 3 | 9 | 150 | - | - | |
Vifa4g00375 | 198 | FunFam | Serine/threonine-protein phosphatase 5 | 1 | 138 | - | - | |
Vifa4g00375 | 198 | ProSiteProfiles | TPR repeat profile. | 79 | 112 | IPR019734 | GO:0005515 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa4g00375 | 9 | 104 | U-box Gene Family | AT3G07370 | 32.292 | 7.48e-11 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa4g00375 | K04460 | - | gmx:100820099 | 248.44 |