Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00369 ATGGCGGAACTAGACTTAATAGGAATACCGTTTCTATCAAGAAATCAATCGGAAGCGCTAGCTCCGTTCTACAAAAATTTGCAGCGGATATGCGCTGAAGGTCCAAGGTTCGGCGATATGTTGAAGGGCACCAATATTTTTACCAAAGAGGTTGTAGCTATCAAGATTTTGAACATTCCGGATAACCAGAAAATTTATGGAGTTCCACACAGAATTTTAAATCACGTCTCTATCCTCAAAATGTTATCCCATCCCAATATTGTCCGTTTGCTGAAAGTGATGGAAACTGTAGATGATGTGTTTCTTGTTTTTGAGTATTTTGACATTAGTCTTAAAAGATACTTGGCTGCCAATTACTTGCTTTTCGACATTAAAGGCCAGGAAAAAATTTTTCTACGTCAAGCTCTTACTGGATTGGCATACTGTCATTCTCACAAAATTCTACACAGAGATCTCAAACCTAATAATCTTCTCGTTTCATTCACTAGTTCTCTACGTGTTAATCAAGTCAAGCTATGTGACTTTGATGTGGCAAAAATTATTGAACCTCCTCTTTCACCCTACTCTGAGAGGAAGATGGGGAATCCTTGTTATAAAGCACCTGAACTTTTGATGGGTTCTACCCGTTACTCAACTGCAGTTGATATCTGGTCCATGGGCTGCATATTTGCTGAGATGATTAAGCTCAAACCTCTGTTCGTTGGTAGAGACGAAACTGAGATCTTGACTCAGATATTTTGTTTGCTTGGCGCGCCAACAGAAGAATCCTGGCCTGGCGTGACTTCTATAAGCACCTTTGTTGAACAACATGATCCTTCAACGTTGCCAAAGGACCTTGCTCAAGTGTTCCCAAAGTTCGATCCTGTTGGTGTTGATCTTCTTTCGAAAATGCTTTGCCTGTGCCCAAATGGCAGGATTTCAGCTGATGAAGCTCTTAAGCATCCATATCTTAAAATCAGCCCATGA 966 0.4048 MAELDLIGIPFLSRNQSEALAPFYKNLQRICAEGPRFGDMLKGTNIFTKEVVAIKILNIPDNQKIYGVPHRILNHVSILKMLSHPNIVRLLKVMETVDDVFLVFEYFDISLKRYLAANYLLFDIKGQEKIFLRQALTGLAYCHSHKILHRDLKPNNLLVSFTSSLRVNQVKLCDFDVAKIIEPPLSPYSERKMGNPCYKAPELLMGSTRYSTAVDIWSMGCIFAEMIKLKPLFVGRDETEILTQIFCLLGAPTEESWPGVTSISTFVEQHDPSTLPKDLAQVFPKFDPVGVDLLSKMLCLCPNGRISADEALKHPYLKISP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00369 321 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g00369 321 SMART serkin_6 25 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g00369 321 Gene3D Phosphorylase Kinase; domain 1 39 108 - -
Vifa4g00369 321 FunFam Mitogen-activated protein kinase 110 320 - -
Vifa4g00369 321 SUPERFAMILY Protein kinase-like (PK-like) 37 318 IPR011009 -
Vifa4g00369 321 PANTHER CELL DIVISION PROTEIN KINASE 36 317 - -
Vifa4g00369 321 Pfam Protein kinase domain 37 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g00369 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Vifa4g00369 321 Gene3D Transferase(Phosphotransferase) domain 1 125 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00369 Vifa-Chr4 98528498 98530127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00369 24 318 Core Cell Cycle Gene Families AT3G48750 42.373 1.14e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Vifa4g00369 Pkinase 4.8e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00369 K02206 - psat:127128144 315.079