Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00310 ATGGATTTTAAGACACCTCTCTTTCTTTTGTTTGTTCTTGGCTCAACTTCCCAAGCTCTCAAATTCGATATCGGCGGAACCGATGGATGGTCTCTAAACCCTTCCGAGAATTACAACGAATGGTCAGGGAGAAACAGGTTCCAAGTCAACGACGTTCTAGTTTTCAAGTACAAGAAGGGTTCAGACTCGGTGTTGGAAGTGACAAAAGAAGCTTATGATAAATGCAACAAAACAAACCCAATCAAAAAGTTGGAAGATGGTAACACAGAGTTTACTTTGGATCGATCTGGACCATTCTATTTCATTAGTGGAACTGATCAAAATTGTGAAAAGGGTCAGAAATTAAACCTTGTTGTCATATCCCCACGAGGACACACACCATCTTCTGCTGCTCCTTCACCGTCTACCACCACTCTATCTCCCTCTGTTTCTCCTTTACCATCTGTAACCACTCCATCTCCTTCTGTTTCAACTTCTCCCACTGCAAATTCACCATCCGTCAGTACGCCTCCAGCCGGTGAACCTACGGCTCCACCTCCTACGGCGGGTGGACCACCTGCTCCATCACCGATGTCTCCTTCCATGGGCGCTTCACCGCCATCTCAATCTCCAACTGTACCATCAGACGGTGCTGCGGCGCCGGGTGCAGAGTCTCCGGCACCTGGGGCAACAGCGGTTCCACCGGCCTCATCTGATTCAATAGCGCCTTCGAGTTCTCTGGTGTATTCCGTTGCAGTTGTTGTGGGTGCTGTGTTTTTGTGTTACTGA 768 0.4818 MDFKTPLFLLFVLGSTSQALKFDIGGTDGWSLNPSENYNEWSGRNRFQVNDVLVFKYKKGSDSVLEVTKEAYDKCNKTNPIKKLEDGNTEFTLDRSGPFYFISGTDQNCEKGQKLNLVVISPRGHTPSSAAPSPSTTTLSPSVSPLPSVTTPSPSVSTSPTANSPSVSTPPAGEPTAPPPTAGGPPAPSPMSPSMGASPPSQSPTVPSDGAAAPGAESPAPGATAVPPASSDSIAPSSSLVYSVAVVVGAVFLCY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00310 255 Gene3D - 18 123 IPR008972 -
Vifa4g00310 255 ProSiteProfiles Phytocyanin domain profile. 20 121 IPR003245 GO:0009055
Vifa4g00310 255 FunFam Early nodulin-like protein 1 19 124 - -
Vifa4g00310 255 MobiDBLite consensus disorder prediction 122 170 - -
Vifa4g00310 255 PANTHER BLUE COPPER PROTEIN 20 153 IPR039391 GO:0009055
Vifa4g00310 255 CDD OsENODL1_like 21 120 IPR041846 -
Vifa4g00310 255 MobiDBLite consensus disorder prediction 122 236 - -
Vifa4g00310 255 Pfam Plastocyanin-like domain 30 113 IPR003245 GO:0009055
Vifa4g00310 255 SUPERFAMILY Cupredoxins 19 120 IPR008972 -
Vifa4g00310 255 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00310 Vifa-Chr4 72849113 72849977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00310 3 136 Phytocyanin Superfamily AT4G27520 56.522 2.88e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00310 - - psat:127075434 248.825