Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00297 ATGGATCCTAATCATTTTCATTATCAACAAGCTATGTTCAATTACATGTCAAATTATCAAAATCCTAATCCTCAAAATTCTCAATTTCCATATGTGCCAACAAACTCCGCCATATTTTTTCCGGAAACACCGATTGGGTTTATGTCCGGATGTCAAGTTCCACCCGTTTCTACTCAAGTTGGTACTGAAAAAGAAGAAAGGGTTGTCGTTAAAAAAAAATCTCGAGAGCAATTTACAAGGGATGAAGATATACTGCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAAGCTGAGAGTTTTTGGTTAAGAATCGCTGCCAATTATAACCAGTATCGTGGGCAATCGCGGGAAAAGTTAGGCGGACAATTAAAATGTCGATGGCATCGAATAAATGGCTTGGATGAAGGTACAACATTCAATCTTGAGTATGTATGGCGATTGTTAAAAGATGAACCTAAATGGATGGGAGAATCGATTGGAAATTCTTCAAAAATTACAAAGAGCTCTGCTAGTGGGGCATCATCGGATAACCCAAATACACCTTCAAGTTATGAGTTTAACTCATCATCACCAATGAAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGGCAAAGGAAATTCCAAATGCAATGCAAGATGCAAGGATTAAAAGAGCAGCAGCAATAGAAAGACTAGCTCAATGTAAGGAGGACGAGCTATAA 735 0.3837 MDPNHFHYQQAMFNYMSNYQNPNPQNSQFPYVPTNSAIFFPETPIGFMSGCQVPPVSTQVGTEKEERVVVKKKSREQFTRDEDILLIQSWLNVSKDPIVGVDQKAESFWLRIAANYNQYRGQSREKLGGQLKCRWHRINGLDEGTTFNLEYVWRLLKDEPKWMGESIGNSSKITKSSASGASSDNPNTPSSYEFNSSSPMKRPMGQKAAKRKGKAKEIPNAMQDARIKRAAAIERLAQCKEDEL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00297 244 MobiDBLite consensus disorder prediction 167 202 - -
Vifa4g00297 244 Pfam No apical meristem-associated C-terminal domain 146 228 IPR029466 -
Vifa4g00297 244 PANTHER - 60 220 - -
Vifa4g00297 244 MobiDBLite consensus disorder prediction 167 223 - -
Vifa4g00297 244 Coils Coil 222 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00297 Vifa-Chr4 65873644 65874479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00297 71 243 Glutathione S-transferase Gene Family AT5G41240 26.027 4.45e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00297 - - psat:127115199 306.605