Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00293 ATGAAACAATTTATTCGCAAATTCTCTTGTATTAATGACTCTTCGAGTTACTCTCTTCTCCAATCCAACTCAATCAAATCACAACAGGCCGAATCAATCCATTCAGATCATGTGCCAGAGGGTCATGTACCGGTGTATGTGGGAGAAGAAATGCAGCGATTCATCCTCAATACAGAGTTACTCAATCATCCAGTTTTTGTGAACCTCCTCAATTTATCGGCTCAAGAATACGGTTACAAACAGAAAGGTGTGATTCGAATTCCATGTCGTGTTTCCGTGTTTGAACAAATTCTTGAAGCAGTTCGACTCGGTCATGACCCACAAATTATTTGCGACATCCTCGATTCCTCATCCGATGAGGCTTCTTAA 369 0.4092 MKQFIRKFSCINDSSSYSLLQSNSIKSQQAESIHSDHVPEGHVPVYVGEEMQRFILNTELLNHPVFVNLLNLSAQEYGYKQKGVIRIPCRVSVFEQILEAVRLGHDPQIICDILDSSSDEAS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00293 122 Pfam Auxin responsive protein 21 100 IPR003676 GO:0009733
Vifa4g00293 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00293 Vifa-Chr4 64464688 64465056 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00293 38 113 Calmodulin-binding Proteins AT2G24400 42.105 1.31e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00293 K14488 - ini:109178013 138.658