Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00269 ATGATTCATTCTACCAGTTTGTATTCTATTCATCAAAAACCCAACCATTCCTCCCTTTATCTCATCTCAATTCCAACAGACTCACCTCTTCTTTCACCCATCTCAATTCCAGCATACTCCCTCTCTTCACACAACCCATCATCCTCCACGGTCCGTCACTTGCAACCTTCCGCCGGTACCTTTCCATCTGCCCATCTTCTCACACCCTATGCAGAAACAAAAGGGATAAACAAAACCGTCGATCCAATCAACGATAGCAAGTACGAACATATACTCGAAAGTTTCGCCGAGAAACTAGTGAAAGAGAGGCCTTCGCTTTCATTTGTCATGGCTGCTTCAAACACACCTGTTAGGCCGAATTCTCCTTCAGTGACATTAAGCCTCTCTCCCTCGACAGTTGCAGCACCTCCTCCGTGGATGCAGCCTATACGAGGACCGGACAATGCGCCTCTTGTTCTTGGGAATGTTGCTCCTCACGGCGCGGTTCTGTCTTATGGCGAAAACATGGTGATGTCTGAGTTAGTAGATTGCTTTAGAATGGAGAATGCTCCAACCATCGGAAACCACCTTGGATCCGACGACACCAGGACACACTGTCCACTTCCAGAAGCCACTGCATTAATCCGCCACGGCCTTCTCTCCAACTCGCGAGGACCACCCATCAACTCAACAACCACTCCATCAAACAGCAGCAAACCCCTTCAATCTTCACCGTCGCGACACCACCTCCATGAAGCGCACAACCTCTGCTCCTCCGAAGAATCTCTCGACGAGATCTGCACCACCAGAAACCAAAGCCAAAATCGTACCACAATGATCGAGACAGACTCACCTCTTCTTTCACCCATCTCAATTCCAGCATACTCCCTCTCTTCACACAACCCATCATCCTCCACGGTCCGTCACTTGCAACCTTCCGCCGGTACCTTTCCATCTGCCCATCTTCTCACACCCTATGCAGAAACAAAAGGGATAAACAAAACCGTCGATCCAATCAACGATAGCAAGTACGAACATATACTCGAAAGTTTCGCCGAGAAACTAGTGAAAGAGAGGCCTTCGCTTTCATTTGTCATGGCTGCTTCAAACACACCTGTTAGGCCGAATTCTCCTTCAGTGACATTAAGCCTCTCTCCCTCGACAGTTGCAGCACCTCCTCCGTGGATGCAGCCTATACGAGGACCGGACAATGCGCCTCTTGTTCTTGGGAATGTTGCTCCTCACGGCGCGGTTCTGTCTTATGGCGAAAACATGGTGATGTCTGAGTTAGTAGATTGCTTTAGAATGGAGAATGCTCCAACCATCGGAAACCACCTTGGATCCGACGACACCAGGACACACTGTCCACTTCCAGAAGCCACTGCATTAATCCGCCACGGCCTTCTCTCCAACTCGCGAGGACCACCCATCAACTCAACAACCACTCCATCAAACAGCAGCAAACCCCTTCAATCTTCACCGTCGCGACACCACCTCCATGAAGCGCACAACCTCTGCTCCTCCGAAGAATCTCTCGACGAGATCTGCACCACCAGAAACCAAAGCCAAAATCGTACCACAATGATCGAAACAGGAAGAATCTCTAGTGCAACAATTCTGTGCGGAGATTGGAGTGAAGAGAAGAGTGCTAAAGGTTTGGATGCATAA 1647 0.4942 MIHSTSLYSIHQKPNHSSLYLISIPTDSPLLSPISIPAYSLSSHNPSSSTVRHLQPSAGTFPSAHLLTPYAETKGINKTVDPINDSKYEHILESFAEKLVKERPSLSFVMAASNTPVRPNSPSVTLSLSPSTVAAPPPWMQPIRGPDNAPLVLGNVAPHGAVLSYGENMVMSELVDCFRMENAPTIGNHLGSDDTRTHCPLPEATALIRHGLLSNSRGPPINSTTTPSNSSKPLQSSPSRHHLHEAHNLCSSEESLDEICTTRNQSQNRTTMIETDSPLLSPISIPAYSLSSHNPSSSTVRHLQPSAGTFPSAHLLTPYAETKGINKTVDPINDSKYEHILESFAEKLVKERPSLSFVMAASNTPVRPNSPSVTLSLSPSTVAAPPPWMQPIRGPDNAPLVLGNVAPHGAVLSYGENMVMSELVDCFRMENAPTIGNHLGSDDTRTHCPLPEATALIRHGLLSNSRGPPINSTTTPSNSSKPLQSSPSRHHLHEAHNLCSSEESLDEICTTRNQSQNRTTMIETGRISSATILCGDWSEEKSAKGLDA 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00269 548 MobiDBLite consensus disorder prediction 465 486 - -
Vifa4g00269 548 MobiDBLite consensus disorder prediction 216 237 - -
Vifa4g00269 548 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 327 428 - -
Vifa4g00269 548 MobiDBLite consensus disorder prediction 461 494 - -
Vifa4g00269 548 MobiDBLite consensus disorder prediction 212 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00269 Vifa-Chr4 57317280 57329476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00269 308 428 MYB Transcription Factor Family AT2G37630 36.310 1.91e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00269 K09422 - gmx:100819082 158.303