Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00243 ATGAAGAAGATGAATGTATTACTAAGAAAGTGCAAGAGCTTGTCAAAACAATTAGGAAGATCATCATCATATAGTAGCTTAAGATCAAAATCAAAGAGAGAAGATTTATATGATGGACATGGCATGGAACAAGATGAGAATTGTGAAACTATATTTGTTGGAAGCTCAAGGAAACGGTATGTGATAAGGTCAAAGTATTTAAACCATCCTCTTCTTGATGCTTTGATCAACAAGAATAAGCAAGATGAAAATGTTTTGGTTGTTAATTGTGAAGTTGTTTTGTTTGATCATTTATTATGGATGCTAGAAAATGCAGATCCTAAGTTTGGTTCCGAATCTTTGGAAGAATTGGCTGAACTTTATGTGTTTTAA 372 0.3226 MKKMNVLLRKCKSLSKQLGRSSSYSSLRSKSKREDLYDGHGMEQDENCETIFVGSSRKRYVIRSKYLNHPLLDALINKNKQDENVLVVNCEVVLFDHLLWMLENADPKFGSESLEELAELYVF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00243 123 Pfam Auxin responsive protein 11 102 IPR003676 GO:0009733
Vifa4g00243 123 MobiDBLite consensus disorder prediction 19 41 - -
Vifa4g00243 123 PANTHER EXPRESSED PROTEIN 7 122 - -
Vifa4g00243 123 MobiDBLite consensus disorder prediction 27 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00243 Vifa-Chr4 48191666 48192037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00243 50 102 Calmodulin-binding Proteins AT4G34750 32.759 5.56e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00243 - - gmx:100500162 179.489