Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00226 ATGGAATTAGAGAGTAAAAATCAACTTCAAAAACAAAATGGAGGAACCAATTTTTTCAAAACATGTTTCAATGTACTCAATACCTTAACAGGTATTGGAATACTCTCAATGCCATATGCAGTTTATCAAGGAGGCTGGTTTAGTTTCATGCTGCTAATAATTTTTGGTGTGATAAGTTGTTACACAGCTTTACTTTTGGAAAAATGCATGAACCTAAATCCAAAAATAAAATCTTACGCTGATATAGGTGAGGTTGCATTTGGGTACAAAGGAAGAGCTATGATAGCTGTTTTCATATATTTAGAGGCATTTTTAATATGTGTGGAGCTTCTTATATTAGAAGCAGATAATTTGGAGAAGCTTTTTCCGAATATGAGATTCACGATCTTTGGGGTAAAAATTGGTGGTAAAAGTGGTTTTGTTTTTCTCACTGCTTTGGCGATATTGCCAACAACATGGCTGAGAAACTTGGGAGCTTTGGCTTATATTTCTGTTGGCGGGGTGCTTACTTCAGTTATTTTGATTGGTTGTGTTATGTGGGTGGGTGAAGTTGATGGTGTGGGATTTCATGAAAGAGGTGATGTGATACATTGGAGTGGATTGTCTACTTCTATGAGCATTTTTGCTTTTTGTTATAGTGCTCATTCTTTGATGCCTACAATACGCAGTTCCATGACTGACACAAAACAGTTTTCTAAGGTTGTATTGGTTTGCTTTGTGATAAGCACTATTATATATGGAACCATTGCCATTCTAGGCTACATGATGTTTGGAGATAATCTAAAGTCTCAAATCACATTAAATTTACCCAAAAACACTATAAGTACAAAAATAGCAATCTATTCCACCGTAATTAATCCTTTCACTAAGTATGCTATTGAAATCAGCCCCATAACAATTGCTATTGAGGACAAATGGAATCTATGCATGAGAAGACCTATTAGCATTATAGTTAGAACAACTATTGTTGCTAGTAGTGTACTTGTGGCACTATGCATTCCCTTTTTTGCATACATTATGGCATTTACTGGTGCTTTTTTGAGTGTGGCAATATCGTTGTTGTTCCCTTGTGTTTGCTATTTAAAGATGAATAAAGCTGGTAAGAAATTTGAGTTAGAGATGATGATCATCATGGGAATTCTTGTCATTGGTACATTGATTGGAATACAAGGCACATATATATCAGTGGGGCAAATAGTAAATCAGATGAAGCATTGA 1218 0.3514 MELESKNQLQKQNGGTNFFKTCFNVLNTLTGIGILSMPYAVYQGGWFSFMLLIIFGVISCYTALLLEKCMNLNPKIKSYADIGEVAFGYKGRAMIAVFIYLEAFLICVELLILEADNLEKLFPNMRFTIFGVKIGGKSGFVFLTALAILPTTWLRNLGALAYISVGGVLTSVILIGCVMWVGEVDGVGFHERGDVIHWSGLSTSMSIFAFCYSAHSLMPTIRSSMTDTKQFSKVVLVCFVISTIIYGTIAILGYMMFGDNLKSQITLNLPKNTISTKIAIYSTVINPFTKYAIEISPITIAIEDKWNLCMRRPISIIVRTTIVASSVLVALCIPFFAYIMAFTGAFLSVAISLLFPCVCYLKMNKAGKKFELEMMIIMGILVIGTLIGIQGTYISVGQIVNQMKH 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00226 405 PANTHER AMINO ACID TRANSPORTER 9 386 - -
Vifa4g00226 405 Pfam Transmembrane amino acid transporter protein 16 394 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00226 Vifa-Chr4 44827306 44830035 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00226 4 403 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.554 2.66e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00226 K15015 - gmx:100812006 567.385