Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00225 ATGGAATTGGAGAGTAAAAACCAACTCCAAGTTTCAAATGCAGACCAACAAAGTGAAGGAACCAATTTTTTCAAAACTTGTTTCAATGTAATCAATACATTGACAGGTATTGGAATACTCTCAATGCCATATGCAGTTTATCAAGGAGGATGGTTTAGTTTTCTGCTGCTGATTATTTTCGCAATGATATGTTGCTACACAGCTTTACTTTTGGATAGATGTATGAATGCAAATGCGCGAATCAAATCATATGCTGATTTAGGTGAGGTTGCTTTCGGCTACAAAGGAAGATCTATATTAGCTATTTTCATATACATAGAGTTGTTTTTAGTTGCTGTGGAGCTTCTTATATTAGAAGGAGACAATTTGGAGAAGCTTTATCCAAATATGAGATTCACAATTTTTGGTCTTAGAATTGGTGGTAAAACTGGTTTTGTTATTCTCACTGCTTTTGCAATACTTCCAACAACATGGTTGAGAAACTATGGAGCTTTAGCCTATGTTTCTGTTGGTGGGGTGTTTACTTGTGTTGTTTTGATTGGATGTGTTGTCTGGGTGGGTGAAGTTGATGGTGTTGGGTTTCATGAAAGAGGTGTGTTACTAAATTTGGGAGGGTTGTCTACTTCTATGAGCCTTTTTGCTTTCTGTTACAATGCTCATGCATTAATGCCAACAATACGTAATTCCATGTCTGACACAAAACAATTTTCTAAGGTTTTGGTTGTTTGCTTTGGTGCAAGTGCTATGATCTATGGAACTATTGCTGTTCTAGGTTACATGATGTTTGGAGATAGTTTAAAGTCACAGATCACATTAAATTTACCAACAAACACTATAAGTACTAAAATAGCAATTTATTCCATCATGATTAATCCTTTCACTAAGTATGCTATTATAATCAGTCCAATAACAATTGCTATTGAGGAGAAATGGCATATATGCATGAGCAGACCTATTAGCATTGTAGTTAGAACAACTATTGTTGCTAGCAGTGTTCTTGTGGCACTATACATTCCCTTTTTTGCATACATTATGGCATTTACTGGTGCATTCTTGAGTGTTGCAATCTCATTGTTGTTCCCTTGTGTGTGCTATTTAAAGATAAATAAAGCTGCTACGAGATTTGGACTAGAGATGATGATCATCATGGGAATTCTTATCATTGGTACATTGATTGGAATACTTGGCACATATATCTCAGTTGAGAAAATAGTTAATCAGATGAAGCATTGA 1233 0.3528 MELESKNQLQVSNADQQSEGTNFFKTCFNVINTLTGIGILSMPYAVYQGGWFSFLLLIIFAMICCYTALLLDRCMNANARIKSYADLGEVAFGYKGRSILAIFIYIELFLVAVELLILEGDNLEKLYPNMRFTIFGLRIGGKTGFVILTAFAILPTTWLRNYGALAYVSVGGVFTCVVLIGCVVWVGEVDGVGFHERGVLLNLGGLSTSMSLFAFCYNAHALMPTIRNSMSDTKQFSKVLVVCFGASAMIYGTIAVLGYMMFGDSLKSQITLNLPTNTISTKIAIYSIMINPFTKYAIIISPITIAIEEKWHICMSRPISIVVRTTIVASSVLVALYIPFFAYIMAFTGAFLSVAISLLFPCVCYLKINKAATRFGLEMMIIMGILIIGTLIGILGTYISVEKIVNQMKH 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00225 410 PANTHER AMINO ACID TRANSPORTER 12 390 - -
Vifa4g00225 410 Pfam Transmembrane amino acid transporter protein 21 400 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00225 Vifa-Chr4 44743474 44744785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00225 4 408 Amino Acid or Auxin Permease AAAP Family AT3G28960 43.489 5.22e-127 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00225 K15015 - gmx:100812006 551.977