Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00219 ATGTTTGCGATAATATGTGGGATCTCGTTGGTATTGTTCATTCTAATCCAATGGTATCCCAAGTCTAGAAAAAGCAAGAACTCACCTCCTTCTCCTCCAAAGCTACCCATTATAGGAAATCTCCATCAACTTGGTAAATTCCCCCACCGCACATTTCTATCTCTAGCTAAAAAATATGGCCCTGTCATGCAAATCCATCTTGGTAGTGTTCCATGTCTCTTGATCTCATCCTCCGAAGCAGCACGTGACGTGATGAGAACCCATGATCATCATTTCGCAGACAGACCCCAAAAGAACAATTACAAGATACTTATATATGATTGCAAAGATGTTTCAACTGCTCCTTATGGAGATTACTGGAGACAGTTAAGGAGCATCTCTGTCTTGCATCTTCTCAGTGCTAAAAGGGTTCAATCTCTTCGCTCCGTACGAGCCGAAGAAATCAGTTTAATGATGGAAAAGATAAAGCATTCTTCTTCTACTTCTGAGCCGCTAAATTTAAGTCAACTCATCGCTTCCACGGTAAATGATATTGTTTGTAGGGTTGCTTTGGGAAGAAAGTATAGTGGTGAAGAAGGAAAGGGATTTAAAAAGTTGTTCAGGGAATTTACCAATTTACTCGGTATGTTTATTGTTGGAGACTATGTACCTTGGCTTGATTGGGTCACCCATGTCTCTGGAACTTATGGAAGAGCTAGAAGAGTCGCCAAACGCTTTGATGATCTTTTGGAGGATGTTGTTGAAGATCATATCAAAACTCACAAACAAGCCAATCATGATCTGGGTGAAGAAAACCATAAAGATTTTGTTGATGTTTTGCTTTGGATCCAGAGGACTGAAGCACTTGGCTTTCCTATTGACAGAATTGTCATAAAGGCTCTCTTATTGGACATGTTTATTGGAGGTACAGGCACCACGGCTAGTTTGCTGGATTGGGAAATGTCAGAGCTGATAAAGAATCCGCACATGATGAAGAAATTGAAAGAAGAAATAAAAAGTGTTGCAAATGGTAAAACACACATAACAGAAGACGATTTGGTTAACATGAAATACTTAAAGGCAGTGGTTAAAGAAACACTACGATTACATCCTCCATCACCGCTACTAATCCCTCGAGTAAACAAAGAAGACACCGAATTCAATGGTTACCATATAAAAGCCGGGACACAAGTTATTATAAACATTTGGGCGATTGCAAGAGATCCTGCAAATTGGGATTCACCAGAAGAATTCAAGCCAGAAAGATTCTTGGATAATACAATAGATGTTAAGGGTAATGATTTCACATTGATTCCATTTGGATCAGGGAGAAGAGGTTGCCCTGGGGTTGTGTATGCTTTGTCTGTCAATGAAATTATGTTGGCCAACATTGTGCATCAGTTTGACTGGGAAATACCTGGAGGCTTTGAGACATTAGATATGGCTCCATCAACTGGCTTTCTTGCGCATAAAAATACTCCTATTATCGCTCTTGCAACTCCTACTAGTAAGTAA 1494 0.3983 MFAIICGISLVLFILIQWYPKSRKSKNSPPSPPKLPIIGNLHQLGKFPHRTFLSLAKKYGPVMQIHLGSVPCLLISSSEAARDVMRTHDHHFADRPQKNNYKILIYDCKDVSTAPYGDYWRQLRSISVLHLLSAKRVQSLRSVRAEEISLMMEKIKHSSSTSEPLNLSQLIASTVNDIVCRVALGRKYSGEEGKGFKKLFREFTNLLGMFIVGDYVPWLDWVTHVSGTYGRARRVAKRFDDLLEDVVEDHIKTHKQANHDLGEENHKDFVDVLLWIQRTEALGFPIDRIVIKALLLDMFIGGTGTTASLLDWEMSELIKNPHMMKKLKEEIKSVANGKTHITEDDLVNMKYLKAVVKETLRLHPPSPLLIPRVNKEDTEFNGYHIKAGTQVIINIWAIARDPANWDSPEEFKPERFLDNTIDVKGNDFTLIPFGSGRRGCPGVVYALSVNEIMLANIVHQFDWEIPGGFETLDMAPSTGFLAHKNTPIIALATPTSK 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00219 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vifa4g00219 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 Gene3D Cytochrome P450 19 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 Pfam Cytochrome P450 29 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 FunFam Cytochrome P450 83B1 15 491 - -
Vifa4g00219 497 SUPERFAMILY Cytochrome P450 29 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00219 497 PANTHER CYTOCHROME P450 71B11-RELATED 15 493 - -
Vifa4g00219 497 CDD CYP71-like 58 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00219 Vifa-Chr4 44093027 44094600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00219 1 496 Cytochrome P450 AT3G48270 48.096 5.32e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00219 - - gmx:100819183 568.54