Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00214 ATGAGAATTCTTCCTTCTTTGTTTTTTATTACTATAATATTCTTCTTCTCCAAATTTTCCTATGGGGCAGATACTATTACTCCATCAGTGTCACTTTCCGATGGAAGCACCTTGATTTCCAAAGATGAAACCTTCGAGTTGGGTTTCTTCAATCCCGGTAATTCCTCAAACCGCTACGTTGGCATTTGGTTCAAAAACATCCCGGTTAAAACCGTTGTTTGGGTTGCAAATCGTGATAATCCTATCAAAGACAACTCAAGCACGTTGATCATAAACAAACAAGGTAATCTCGTTCTTCTCAACCGCAACCAATCTCTTCTATGGTCAACAAACACAACAAAGAAGTCTTCAACTCCAATTGTCCAGCTTCTCAACAACGGAAATTTAGTGATTAGAGACGAGAAAGTCAGTGAAAGTGATGAAGACAGTTTTTTATGGCAGAGCTTCGACTATCCTAGTGATACGTTACTACCAGAAATGAAGATTGGGTGGGAGAAGAAAAGTGGTATTCATAGAATATTTACTGCGTGGAAAAACTGGGAGGATCCATCTTTAGGTGATTTTACATCATTCATGAGCGTTAGTAATAATCCTGAAGTGGTTCTTTTCAAAGGCTCATCCGAGTTCTTCAGAACAGGACCTATGACTGGTACTACGGATAGTGGAGCTTACGGGCTGAAGGCTAACCCGATTTTTAATTCAGACGTTGTAAGCAGTGAAGATGAAGCGTATTTTTCGTACACACTAAAGGACAAATCTGTGATTTCCATAGTTGTTTTAAATCAGACTCTTATGCTTCTTCAACGCCTTGTATGGATTCCTGAATCTAGAAAATGGAGTACTTACATGAACCTACCACATGATACTTGTGATGGTTATAACGTGTGTGGAGCATATGGAAACTGTGACATTAACGGATCGCCACTTTGTCAGTGTTTGGATGGGTTTAAGCCAAAATCAGCGCAACAGTGGAGCACAATGGACTGGGCAGATGGATGTGTGCACACTGGAAATTGGAGCTGTGGAGTTAAGGGTAGAGACGGTTTTCTTAAAGTTACTGGAGGGAAGTTGCCAGATACTACAAATACATGGGTTAATGCAAATATGACAATTGATGATTGTAAGATCAGATGTTTGCAAAATTGTTCCTGCACAGCTTACTCAAGCTTAGGCCCAGACGACGATTCCGGCGGTTGTTGCCTATGGTTTAATGATCTTAAAGATTTGAGAGGTTCAGATTCTCAGAGAAACTTCTATGTGCGAATTGATGCATCAGATATAGGTGATAAACATGAGCATACAAAAATGATTATCTTGGTAGTTTCGATCGTTGTTTTTGCTACCATTGTGATAATATTGGCGCTATACATTTATCGAGAAAAGATGAAGTACAAAGAAGGCAATAATGAAGGCGAGCATGACGATTTAGACCTCCCCTTCTTTGATCTTGCTACTATACTTGAAGCCACAGATTACTTCTCAAATGCAAACAAACTGGGTGAAGGTGGTTATGGACCTGTATACAAGGGTAAGTTGCAAGATGGTCAAGATATTGCAGTAAAAAAACTTTCAAAAAGATCTACACAAGGAATGAAAGAATTTAAGAATGAAGTTATTTTATGTTCTAAACTTCAACACCGAAACCTTGTTAAAATAATTGGTTGTTGCGTTGAAAAAGATGAAAAAATGTTGGTCTATGAATATATGTCCAACACAAGCCTTGATTCATTTATTTTTGATCCAATTCAAAGCAAATTATTAGACTGGCCTATGCGTTTCAACATCTTATATGGAATTGCCCGAGGTCTTCTTTACTTGCATCAAGATTCCAGGTTAAGAATTGTGCACAGAGATTTGAAAGCGAGCAATATTTTATTAGACAATGATATGCAACCAAAAATTTCGGATTTTGGTCTTGCTAAAATGTGTGGAGGTGACAACATGGAAGGTGAAACAAGTCTAATAGTTGGCACATATGGTTATATGGCACCTGAATATGCCATTGACGGATTATTCTCAGTTAAATCAGATGTATTTAGCTTTGGTGTCTTATTACTTGAACTTATAAGTGGAAAGAAAAACAGAACTCTTACCTATAATCAAGACGATCACAATCTTATTGGACATGCATGGAAGTTATGGAAAGAGGATAACATACAATCACTGATTGATGATAATTTGAAAGATACGTGTATTCTTTATGAAGCTTTGCGATGTATTCAAATAGGGCTTTTGTGTCTGCAACATCATCCTGATAATAGGCCAAATATGGCATCTGTTGTTGTGATGTTGAATAGTAATAATAATAGTTTACCTCTACCACATGAACCAGGTTATTTATTACAAAACATAACAAGCGAAGGAGAACCTTTTACCGAAAGACAAAGACCTTCTTCAATAAATAATGTAACTATCTCACTATTAAATCCAAGATAG 2436 0.3723 MRILPSLFFITIIFFFSKFSYGADTITPSVSLSDGSTLISKDETFELGFFNPGNSSNRYVGIWFKNIPVKTVVWVANRDNPIKDNSSTLIINKQGNLVLLNRNQSLLWSTNTTKKSSTPIVQLLNNGNLVIRDEKVSESDEDSFLWQSFDYPSDTLLPEMKIGWEKKSGIHRIFTAWKNWEDPSLGDFTSFMSVSNNPEVVLFKGSSEFFRTGPMTGTTDSGAYGLKANPIFNSDVVSSEDEAYFSYTLKDKSVISIVVLNQTLMLLQRLVWIPESRKWSTYMNLPHDTCDGYNVCGAYGNCDINGSPLCQCLDGFKPKSAQQWSTMDWADGCVHTGNWSCGVKGRDGFLKVTGGKLPDTTNTWVNANMTIDDCKIRCLQNCSCTAYSSLGPDDDSGGCCLWFNDLKDLRGSDSQRNFYVRIDASDIGDKHEHTKMIILVVSIVVFATIVIILALYIYREKMKYKEGNNEGEHDDLDLPFFDLATILEATDYFSNANKLGEGGYGPVYKGKLQDGQDIAVKKLSKRSTQGMKEFKNEVILCSKLQHRNLVKIIGCCVEKDEKMLVYEYMSNTSLDSFIFDPIQSKLLDWPMRFNILYGIARGLLYLHQDSRLRIVHRDLKASNILLDNDMQPKISDFGLAKMCGGDNMEGETSLIVGTYGYMAPEYAIDGLFSVKSDVFSFGVLLLELISGKKNRTLTYNQDDHNLIGHAWKLWKEDNIQSLIDDNLKDTCILYEALRCIQIGLLCLQHHPDNRPNMASVVVMLNSNNNSLPLPHEPGYLLQNITSEGEPFTERQRPSSINNVTISLLNPR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00214 811 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Vifa4g00214 811 ProSiteProfiles Protein kinase domain profile. 493 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g00214 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 149 - -
Vifa4g00214 811 Pfam D-mannose binding lectin 71 178 IPR001480 -
Vifa4g00214 811 Pfam PAN-like domain 341 408 IPR003609 -
Vifa4g00214 811 Pfam S-locus glycoprotein domain 210 320 IPR000858 GO:0048544
Vifa4g00214 811 Pfam Protein tyrosine and serine/threonine kinase 496 763 IPR001245 GO:0004672|GO:0006468
Vifa4g00214 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 458 568 - -
Vifa4g00214 811 Gene3D Transferase(Phosphotransferase) domain 1 569 772 - -
Vifa4g00214 811 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Vifa4g00214 811 SMART blect_4 29 152 IPR001480 -
Vifa4g00214 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Vifa4g00214 811 SMART serkin_6 493 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vifa4g00214 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Vifa4g00214 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 755 - -
Vifa4g00214 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 772 - -
Vifa4g00214 811 Gene3D Phosphorylase Kinase; domain 1 467 568 - -
Vifa4g00214 811 CDD PAN_AP_plant 340 422 - -
Vifa4g00214 811 CDD STKc_IRAK 499 765 - -
Vifa4g00214 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 183 IPR036426 -
Vifa4g00214 811 Gene3D - 19 149 IPR036426 -
Vifa4g00214 811 SUPERFAMILY Protein kinase-like (PK-like) 477 782 IPR011009 -
Vifa4g00214 811 ProSiteProfiles PAN/Apple domain profile. 341 423 IPR003609 -
Vifa4g00214 811 CDD B_lectin 29 152 IPR001480 -
Vifa4g00214 811 SMART ntp_6 344 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00214 Vifa-Chr4 41695666 41698623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00214 436 788 Receptor kinase-like Gene Family AT4G23190 48.485 2.74e-119 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vifa4g00214 PK_Tyr_Ser-Thr 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00214 - - tpra:123915292 1095.11