Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00203 ATGGAGACAGAAAGCCAGCTCCAAGTTTCATCAATTTCATGTCAGCACAAAGAAGGAACCTCTTTCTTCAAAACTTGTTTCAATGGACTCAACACCTTAGCAGGTATCGGAATGCTCTCAATGCCATATGCAATTTCTCAAGGAGGATGGATAAGTTTCATGATTTTAATTATTTTCGCCATGATATGTTGGTACACAGCTTTACTTCTAGGAAGATGCATGAATCAACAACCACTAATCAAATCCTATGTTGATATAGCTCATGTTGCTTTTGGTTACAAAGGAAGAGCTTTTATAGCAACTTTCTTATATCTAGAGCTTTTCTTAATTCTTGTGGAGCTTCTTATACTAGAAGGTGACAATTTGGACAAGTTGTTTCCAAACATGAGTTTCAAAATGATTGGATTCAAGATTGGAAGTAAAAGTGCTTTTGTGTTAATCACTGCTTTGATAGTATTGCCAACAACTTGGTTGAGAAGTTTAGGAGCTTTGGCTTATATATCTTTTGGAGGGATAGTAACTTCTTGTATTTTGATTGGTTGTATTGTGTGGGTGGGTGAAGTGGATGGTGTTGGGTTTCATGAAAGAGGAAAGTTGGTGAATTTGGGGGGTTTGTCTACTTCTATGAGCCTTTTTGCTTTTTGTTATTGTGCTCACGCATTGATGCCAACAATATGCAATTCTATGAAGGATAGAAATCAGTTTTCTAAGGTTATGCTGGTTTGCTTTGCCGCAAGCACTGTCATATATGGAACCATAGCAGTATTAGGCTACATGATGTTTGGAGATAATTTGAAATCTCAAATCACATTAAATCTACCAACAAATACAATGAGTACAAAAATAGCAATATATACAACAGTAATTAACCCTTTCACTAAGTATGCTATTGTAATCACTCCAATAATCAATGCCATTGAAGAAAAATGGCATCTTTGCAAGAAAAGGCCTATCAGCATTCTCATTAGAACCACCGTTGTTGTCAGCAGTGTACTTGTGGCACTATTTGTTCCATTGTTTGGATACATTATGGCATTTATTGGTGCTTTCTTGAGTGTGGCAATCTCATTGTTGTTTCCTTGTCTATGCTACTTAAAGATGCACAAAGCTGCAAGAAGATTTGGGTTAGAGTTGATCATAATTGTAGCAATTCTGGTTATTGGTATATTTATTGGAGTACAGGGTACTTATATTTCACTTGTGCAAATAGTAAATAGTATAAAGCCATGA 1230 0.3585 METESQLQVSSISCQHKEGTSFFKTCFNGLNTLAGIGMLSMPYAISQGGWISFMILIIFAMICWYTALLLGRCMNQQPLIKSYVDIAHVAFGYKGRAFIATFLYLELFLILVELLILEGDNLDKLFPNMSFKMIGFKIGSKSAFVLITALIVLPTTWLRSLGALAYISFGGIVTSCILIGCIVWVGEVDGVGFHERGKLVNLGGLSTSMSLFAFCYCAHALMPTICNSMKDRNQFSKVMLVCFAASTVIYGTIAVLGYMMFGDNLKSQITLNLPTNTMSTKIAIYTTVINPFTKYAIVITPIINAIEEKWHLCKKRPISILIRTTVVVSSVLVALFVPLFGYIMAFIGAFLSVAISLLFPCLCYLKMHKAARRFGLELIIIVAILVIGIFIGVQGTYISLVQIVNSIKP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00203 409 PANTHER AMINO ACID TRANSPORTER 16 389 - -
Vifa4g00203 409 Pfam Transmembrane amino acid transporter protein 19 397 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00203 Vifa-Chr4 35498656 35500293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00203 1 407 Amino Acid or Auxin Permease AAAP Family AT3G28960 45.610 1.45e-136 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00203 K15015 - gmx:100812006 577.015