Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00190 ATGGAAATCAATGTAACATCAACACAAACCATTAAACCATCATCTCCCACATCCAACGAACACAAAACCTACAAACTATGTTTGTTTGATGTGTTTCAACTAAACACATATTTTCCATTGATTCTATTTTATCGAAAAACAAATTACATGCAAGAATTCTCAAATGTCTCAACAAGACTAAATGACTCACTATCTAAGACACTAACAATTTTCTACCCTCTTTGTGGTAGAAGAAACGATATATTCTCTATCGATTGCAACGATGAAGGCGCGATTTACATGGAAGCTTCGATAAACATGGAAATGGAAGAGTTCCTAAGTCCGCCAAAATTGGAATTAATAAACAAATTGCTTCCTTGTGAACCAAACAAGACACATCCTTACAATGAAATCTTGCCACAAATATTAGTCCAAGTGAACATTTTCAAGTGTGGTGGAATAGCTATTGGTTTGTGCAATCTCCATACAATACTAGATGCATATTCTTGTAGTCTATTCTTGAAGACATGGGCCTCTATTTGCAATGGGTCAATGGATGAAATTTGCGAGCCGAGTTTCTCAATTTCTTCTTCGATTTTCCCTCCAAGAAACACTAGCGGTGTTAGAGAAGGCGTGTTGAATATTAACAAAGACTTAGAGATAGAACTGGAGTGCTCTACGAGAAGATTTTTATTTGATAACAAATCAATCAATGAATTGAAAGAAATATCGTCGAAAAACGATGAGATCGAAACAAAATTACATACAACTTACAAGGTATTGTCATCATTTATATGCAAACACATGATTGTAGCATGCATGAAGGAAACTTGTGATGGAAGCAAAAGGCAAGTAGTGGTTTTGCATGTTGTAGACATGAGGAGAAGGATGGGAGAGGGTTTGTTACAAAATTCAGTTGGAAATTTATTATGGCCAGCTATGGTTGTTTGTGAGAATGTCAAAAAGGACACTAAAATTAGTGACATGGTTAGAATTTTGGGAGATGGAATTGGAAAGGTGAATGAAGAATTGTATTTGAAATTGAAAAATGATCCTAGTTTTTTATGGAGTGATGAGTGTGGTGAGTTAATGCTTGAAGATATGGAAAATAAAAATCCAATATCATTTGTGTTTACAAGTTGGGGTAATATGGGATTTAAAGAGATGGATTTTGGTTGGGGAAAGCCTTTATGGATAGCTCAAAGAGGTGGTACAAAAGAAACTATTCCAAATACAGTTGTGTTGATGGAAACATGTGAAGGATTTGAGGCATGGGTTACAATGGCTGAAAAACATTTAGATGATTTGGAAAATGATGTAGAGTTCAACAGATTTGCTATGCTTAATCCTAATATTAATTTCAACAGTGTAGATATTTAA 1359 0.3458 MEINVTSTQTIKPSSPTSNEHKTYKLCLFDVFQLNTYFPLILFYRKTNYMQEFSNVSTRLNDSLSKTLTIFYPLCGRRNDIFSIDCNDEGAIYMEASINMEMEEFLSPPKLELINKLLPCEPNKTHPYNEILPQILVQVNIFKCGGIAIGLCNLHTILDAYSCSLFLKTWASICNGSMDEICEPSFSISSSIFPPRNTSGVREGVLNINKDLEIELECSTRRFLFDNKSINELKEISSKNDEIETKLHTTYKVLSSFICKHMIVACMKETCDGSKRQVVVLHVVDMRRRMGEGLLQNSVGNLLWPAMVVCENVKKDTKISDMVRILGDGIGKVNEELYLKLKNDPSFLWSDECGELMLEDMENKNPISFVFTSWGNMGFKEMDFGWGKPLWIAQRGGTKETIPNTVVLMETCEGFEAWVTMAEKHLDDLENDVEFNRFAMLNPNINFNSVDI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00190 452 PANTHER F21J9.9 5 439 - -
Vifa4g00190 452 MobiDBLite consensus disorder prediction 1 20 - -
Vifa4g00190 452 Gene3D - 1 203 IPR023213 -
Vifa4g00190 452 Pfam Transferase family 1 435 - -
Vifa4g00190 452 Gene3D - 216 437 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00190 Vifa-Chr4 32356722 32358080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00190 1 396 Monolignol Biosynthesis Gene Families AT5G48930 22.434 7.12e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00190 - - gmx:102667966 624.009