Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00167 ATGGCTTCCTCCCTTTTGACAAAGATTCTTTTATCTCCTCGCACGATTCACACTTCCTCCTTATTCACTCACCACCCACCAATTCTCTCTTCATTCTTCAATAAGCAGGTGTTCTCTATAAGAGTTGTTTCAACCTTTACAGCCCAAAACACTAGGTTGACTGGTTGGGCTCCTTGTATGGCTTCTTCAGTAGAGCATGATATTAAGGTGGTGGATGCATCCTGGTATATGCCGGACGAGCAAAGGAATCCAATTCAAGAGTATCAGGTTTCTCACATTCCCGAGGCCCTTTTCTTTGACATAGATGGAATAGCAGACCGCACTACAAATTTGCCACACATGTTGCCTTCAGAGGCAGCTTTTGCCGCTGGTGTTTCTGCTCTTGCCATACAGAACAAAGGCGACCTAGTTTTTTATGACGGAAAAGGACTATTTAGTGAAGCTCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACCGAGTTTGGATAAAGTATATCAGGGACAACCAGTTGGTCCAATCACATTCGAGACTAAATTTCAGCCACGTCTTGTTTGGACCCTTGAACAGGTAA 576 0.4444 MASSLLTKILLSPRTIHTSSLFTHHPPILSSFFNKQVFSIRVVSTFTAQNTRLTGWAPCMASSVEHDIKVVDASWYMPDEQRNPIQEYQVSHIPEALFFDIDGIADRTTNLPHMLPSEAAFAAGVSALAIQNKGDLVFYDGKGLFSEARVWWMFRVFGHDRVWIKYIRDNQLVQSHSRLNFSHVLFGPLNR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00167 191 SMART rhod_4 54 172 IPR001763 -
Vifa4g00167 191 CDD TST_Repeat_1 65 164 - -
Vifa4g00167 191 ProSiteProfiles Rhodanese domain profile. 64 175 IPR001763 -
Vifa4g00167 191 PANTHER THIOSULFATE SULFERTANSFERASE 66 164 IPR045078 GO:0016783
Vifa4g00167 191 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 60 163 IPR036873 -
Vifa4g00167 191 Gene3D - 56 166 IPR036873 -
Vifa4g00167 191 Pfam Rhodanese-like domain 68 164 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00167 Vifa-Chr4 27857686 27859925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00167 65 164 Sulfurtransferasese or Rhodanese AT1G79230 76.000 2.69e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00167 K01011 - gmx:100798053 243.432