Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00164 ATGATTTATTTTGATTTAGGTGGCATCGGGAGCAGCTCTATGGTTCGAAAACTTGAAACAGATGAAATTGATGCTGAAATGTATATTCAGCCTGGAAATCCCTATTTTTTTGCGAAATACTATCATTACAGACCCAATGAATTGCATATACCAAAAAAAGTTATTAAGGATTTCTGCCTCTGCTTCACAAAACATGTCAACCTTATATGTTGCAACTGCAAGGATATAGAGAGCAATGAAATAGCATCTTATCATGAGAAGTTGCCCGAAATGAGCACAAAACATAGCAAAAAGAGAGGAGAAATACGTACATGGAAAAATGGCCGAGTGTTTGTGCTGGGGTGGGAAAATTTTTGGGCCAAGTACAAGATTAAAGAAAGTGATAGCTGCTTGTGTGAAATTGTGTTGCATCAAGAGAAAGCAATAGAAATGATAAGGGTGCACCTTGTTAGGAAGGTTAGGAATGAATGA 471 0.3715 MIYFDLGGIGSSSMVRKLETDEIDAEMYIQPGNPYFFAKYYHYRPNELHIPKKVIKDFCLCFTKHVNLICCNCKDIESNEIASYHEKLPEMSTKHSKKRGEIRTWKNGRVFVLGWENFWAKYKIKESDSCLCEIVLHQEKAIEMIRVHLVRKVRNE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00164 156 SUPERFAMILY DNA-binding pseudobarrel domain 29 135 IPR015300 -
Vifa4g00164 156 Gene3D - 16 154 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00164 Vifa-Chr4 26751296 26751931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00164 30 151 B3 DNA Binding Superfamily AT5G57720 29.508 3.95e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00164 - - mtr:120578114 226.483