Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00161 ATGGCGGGAAAGTCTGACGCAGTATCGATCCACGTTCCGTACAAGAATCTAAGGAACGCTTCTTCCGCCGCCGCCGAGGTCGAACTCGTTGGCTTAGATGAACCTCGTCACCATATCGACCTCAATTCGCCGCGCTCCGATCAATTACCGCCGAAAAGTAGCGCCTCCATTGTTCACCTCGTTCTCAGTTGCACTGTCGCTGCCGGTGTTCAGTTTGGTTGGGCTTTGCAGCTTTCTCTTCTCACACCTTACATTCAGACGTTGGGAATAGGACATGCGTTTTCTTCATTTATTTGGCTTTGTGGCCCCATTACAGGCCTCGTGGTTCAACCCTGTGTTGGTATTTGGAGTGATAAATGTACTTCAAAGTTTGGGAGAAGACGTCCATTCATTCTTGCAGGATCACTTATGATCTCCTTGGCTGTGATACTGATCGGGTTTTCTGCAGACATTGGATATGTATTAGGGGATACACATGAGCATTGCAGTACATTTAAAGGGACTCGAACAAGGGCTGCTGTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCCAACAACACAGTGCAGGGGCCAGCTAGAGCACTTTTGGCAGATCTATCAGGTCCTGATCAACGCAATGTATCAAATGCTGTCTTTTGCTCATGGATGGCAGTGGGAAACATTCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCTTAACAACTAATGCTTGCTGTGAGGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTTGCTGTGGTGTTTTTGACATTATGCACACTTGTAACCCTATATTTTGCTGATGAAATTCCCCTTACTACTGCAAGTCAACATCACCGGTTATCCGATTCTGCTCCTTTATTGGATGAACAACAAAATGGCATTGAATTTTCTAAATCAAAGCCTTTATCTATTATAAATGAGTCCAATGGTGAGACAAGAGAAGATCATTCTGAGGAAGTTGTAAACCTGAAGCATGAGAATTTCAATGCCGGGGAAGATGATAAAGAAATTTTAATGGATGGGCCTGGAGCAGTATTGGTTAACTTGTTAACAAGTTTAAGGCATTTGCCACCTGCTATGCATTCAGTGCTAGTTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGGAGAGAGGTTTATCACGGGGATCCAAAAGGAACCGCTTCTGAAATAAATCTTTATGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTGCTTGGAATTAGCTCTTTTTTAATTGAACCAATGTGTAAGTGGATGGGGGCAAGATCAGTATGGGCAGTGAGCAATTTTGTTGTCTTTGTTTGCATGGCTGGCACTGCTATCATTAGTCTAATTTCTGTCCACGATTATACTGGAGGAATAGAACATGCAATTGGAGCAAGTGAAGGAATCAAGGTTGCTTCCTTGGTTGTGTTTATTCTGCTTGGATTTCCACTTGCGATTACCTACAGTGTTCCATTTGCTGTTACAGCAGAATTGACTGCTGATTCAGGTGGTGGCCAAGGATTGGCTATAGGAGTTCTAAATCTTGCAATTGTTGCTCCTCAGATGATTATATCCCTTGGTTCTGGTCCATGGGATGCTCTCTTTGGCGGTGGCAATATTCCTGCCTTTGTTTTGGCCTCCGTCTGTGCTCTCGTCGGTGGCATTTATGCATTTCTAAAACTGCCAAATCTTTCTAGCAATTCCTTCAAGTCATCCGGATTTCATTTTGGCTAG 1797 0.4374 MAGKSDAVSIHVPYKNLRNASSAAAEVELVGLDEPRHHIDLNSPRSDQLPPKSSASIVHLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKFGRRRPFILAGSLMISLAVILIGFSADIGYVLGDTHEHCSTFKGTRTRAAVVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVSNAVFCSWMAVGNILGYSSGASGKWNKWFPFLTTNACCEACGNLKAAFLVAVVFLTLCTLVTLYFADEIPLTTASQHHRLSDSAPLLDEQQNGIEFSKSKPLSIINESNGETREDHSEEVVNLKHENFNAGEDDKEILMDGPGAVLVNLLTSLRHLPPAMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGTASEINLYDQGVREGAFGLLLNSVVLGISSFLIEPMCKWMGARSVWAVSNFVVFVCMAGTAIISLISVHDYTGGIEHAIGASEGIKVASLVVFILLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVAPQMIISLGSGPWDALFGGGNIPAFVLASVCALVGGIYAFLKLPNLSSNSFKSSGFHFG 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00161 598 CDD MFS_SLC45_SUC 60 580 - -
Vifa4g00161 598 FunFam Sucrose transporter SUC2 58 282 - -
Vifa4g00161 598 Gene3D MFS general substrate transporter like domains 56 580 IPR036259 -
Vifa4g00161 598 SUPERFAMILY MFS general substrate transporter 60 585 IPR036259 -
Vifa4g00161 598 PANTHER SUGAR TRANSPORTER 55 580 - -
Vifa4g00161 598 FunFam Sucrose transport protein SUT5 370 590 - -
Vifa4g00161 598 Pfam MFS/sugar transport protein 75 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00161 Vifa-Chr4 25012843 25027186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00161 143 598 Sucrose Transporter Gene Family AT2G02860 70.806 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00161 K15378 - gmx:100793185 1004.97