Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00121 ATGTTCCGCCGCGCTACATCCACTTTCCTCTCCCGCGCCGCCACTCGCCGCTTCTCCACCGACGTGGCTACCCCCACCACCAATTCCTCCTTCGTTGAAGCGTGGAGGAAAGTTAGCCCCAATATCGATCCACCTAAGACGCCTCTCGAATTCCTCAAAACTCGTCCACCTGTTCCTTCTACCATCCCTACCAAACTCACTGTTAATTTTGTTCTTCCCTATCATTCTCAATTGGCCGCTAAAGAGGTTGACAGTGTTATAATCCCAGCTACAACCGGTGAGATGGGCGTTCTCCCAGGACACGTCGCGACAATCGCAGAGTTGAAACCTGGGGTCCTTACTGTACAAGAAGGAACTGATACAACCAAGTATTTTGTAAGCAGTGGTTTCGCTTTCATCCATGCAAACTCTGTTGCTGATATTATTGCTGTAGAGGCTGTACCAGTGAACCAACTTGATGCAGACCTAGTGCAAAAGGGTCTTCAAGAGTTCACTCAGAAACTCAACTCCGCAACAACGGACTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGACGTGCATAGCGCTCTCAACTCAGCTCTTACAGGCTAA 591 0.4941 MFRRATSTFLSRAATRRFSTDVATPTTNSSFVEAWRKVSPNIDPPKTPLEFLKTRPPVPSTIPTKLTVNFVLPYHSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFAFIHANSVADIIAVEAVPVNQLDADLVQKGLQEFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00121 196 Hamap ATP synthase epsilon chain [atpC]. 64 184 IPR001469 GO:0015986|GO:0045261|GO:0046933
Vifa4g00121 196 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 66 138 IPR020546 GO:0015986
Vifa4g00121 196 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 66 147 IPR036771 -
Vifa4g00121 196 NCBIfam ATP synthase F1 subunit epsilon 77 181 IPR001469 GO:0015986|GO:0045261|GO:0046933
Vifa4g00121 196 Gene3D - 153 195 - -
Vifa4g00121 196 Gene3D - 56 152 IPR036771 -
Vifa4g00121 196 Coils Coil 161 181 - -
Vifa4g00121 196 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 27 196 IPR001469 GO:0015986|GO:0045261|GO:0046933
Vifa4g00121 196 CDD F1-ATPase_delta 66 189 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00121 1 196 Primary Pumps ATPases AT5G47030 67.805 1.81e-97 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00121 K02134 - gmx:100780778 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00121 4 15164573 15167077 Vifa4g00121 4 15164573 15167077 ECH