Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00106 ATGGAAATTTTTGAGATAAGCACAATAATGAAAGTGTTGTTTGGAGCAGTTTTGGTGATTTTGGTTCATATTTTGAATATTTTGGTGTTGAGTCCAAAATCACTTAGAGCAAAGCTTCATAGACAGGGTATTAATGGTCCTTCTCCTCACTTCTACTTTGGCAATATTCCAGAAATAAAGAGACTTTTACTCCAAACTCAATCATCACAAGAAAACAACAAAGATTGTGTTTCAACATCCATTTCTCATGACTGGCATTCTAATCTCTTCCCTCATATTTACAAGTGGAAAAAACAATACGGTCCCATTTTCTTGTTTTCTTCTGGGAGCATACAATGGTTACTGGTGACAGATATAGATATGGTGAAGGAAATTGTCCTACACACGTCTTTGAATCTTGGGAAGCCTTCTTTTATGTCCAGAGATAATAGGCCACTCCTTGGACAAGGTATATTATCATCAAGTGGTCAATATTGGGCTCATCAAAGGAAGATAATTGCCCCTGAACTGTACCTAGAGAAAATGAAGGCAAAGGTCAATATGATAATGGACTCAACAAATGGACTACTAAGATTATGGGATACCAAATTGAAAAACCATGGAGACAGTTTAGAGATTAAAATTGATCAAGATTTGCGAAACTTATCATCTGACATAATTGCAAAAGCTTGTTTTGGAAGCAATTATGTTGAAGGAAGAGAAATATTCACAAAGCTTAGAGAACTTCAAAACGTCATTTCCAAGATATTTGCTGGAATTCCAGGCTATAGATATTTGCCAAACAAAACTAATAGACAAATGTGGAAATTAGAAAAAGAGATAAACTCCAAGATATCAAACCTCATAAAGAAACGCCAAAACAATGCTCGAGATGAACAAGATCTCTTGCAAATGATACTCGACAGCGCAAAGAAATGCAAAAGTGCATCATGGTGCTTAATGTTGTTATCTACACACCCTGATTGGCAAGATCGTGTTCGCGCCGAGGTGCTTGAAGTTGTTGGAAATGATGGTAATATAGATGCAGCTATGCTTAAAAGCTTGAAAATGTTAACTATGGTGATTCAAGAGACATTGAGGCTTTATCCACCAGCGTCATCGGTTAATCGAGAAGTTTTCAAAGACATTGTTTTCAAAGGCCTATTAGTTCCGAAAGGGATGAATATTCACATTCCAATGCCGATTTTGCATCAAGACTCGAAGCTTTGGGGGGATGATGCACATGAATTTAATCCGGAAAGATTTGCAAATGGAGTGCAAGGAGCATGCAAGATTCCACAAGTTTACATGCCATTTGGAATGGGGTCTCGTGTATGTGTAGGACAGCATTTGGCCATGGTTGAGTTGAAGGTGATGTTGTCTCTCATTCTGTTGGAGTTTCGGTTTTCAGTGTCGCCGAGTTATCGTCATTCGCCTTCCTTCCACATGCTTATTGAGCCCGGTCATGGAGTTGTTCTCAACATGACAAAAGTCTGA 1476 0.3814 MEIFEISTIMKVLFGAVLVILVHILNILVLSPKSLRAKLHRQGINGPSPHFYFGNIPEIKRLLLQTQSSQENNKDCVSTSISHDWHSNLFPHIYKWKKQYGPIFLFSSGSIQWLLVTDIDMVKEIVLHTSLNLGKPSFMSRDNRPLLGQGILSSSGQYWAHQRKIIAPELYLEKMKAKVNMIMDSTNGLLRLWDTKLKNHGDSLEIKIDQDLRNLSSDIIAKACFGSNYVEGREIFTKLRELQNVISKIFAGIPGYRYLPNKTNRQMWKLEKEINSKISNLIKKRQNNARDEQDLLQMILDSAKKCKSASWCLMLLSTHPDWQDRVRAEVLEVVGNDGNIDAAMLKSLKMLTMVIQETLRLYPPASSVNREVFKDIVFKGLLVPKGMNIHIPMPILHQDSKLWGDDAHEFNPERFANGVQGACKIPQVYMPFGMGSRVCVGQHLAMVELKVMLSLILLEFRFSVSPSYRHSPSFHMLIEPGHGVVLNMTKV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00106 491 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 483 - -
Vifa4g00106 491 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS P450 superfamily signature 318 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 Pfam Cytochrome P450 310 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 Pfam Cytochrome P450 87 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 Gene3D Cytochrome P450 34 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 Gene3D Cytochrome P450 309 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vifa4g00106 491 SUPERFAMILY Cytochrome P450 85 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa4g00106 491 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00106 Vifa-Chr4 12579591 12582139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00106 121 488 Cytochrome P450 AT5G24900 41.176 3.00e-106 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00106 K24544 - gmx:100780335 649.818