Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00058 ATGCTACTGCTCTTATCTTCACCACCATCCTCTCCCTCACTCATGCTATCTCTTCCATTGAAATTTCTTTGTGCTGTACAAGGACAAGGAGAATCCACTCATGCATGCACTAATAAAAAACAAAAGGATTACATAGTGCAGGATAGTTCCATATTACATCCTGAGAATGTATTAAGGAGGAAACTTGTGCTTTCTGCTTTGGTCACAGCTTTTGTTTTTCCAACTTTATCTTCTAATGCGAAGACTAAAAATATGAATCCGTATAATGAAAAACGCGTGTTGCAACAAAATAGGAATATACAAAAGCAGAACAATGCACCAGATGACTTCCCAAATTTTATTAGAGAAGGTTTTGAAGTTAAAGTGATAGCACCAGATGACTATATAAAACGTGATTCAGGGCTAATATACCGAGATTTTGAAGTTGGTACAGGTGATTGTCCAAAGGATGGTCAGCAGGTCACATTTCACTACGTTGGCTATAACGAATCCGGCCGCCGTATTGACAGCACTTACTTGCAAGGTTCTCCTGCCAAAATTCGCATGGGTAACAAAGCATTGGTTCCGGGATTTGAAGAAGGAATTAGAGACATGAAAGCTGGTGGAAAGAGAAGAATAATTATCCCCCCTGATCTTGGACCCCCGGTTGGGCCTTCAACATTTTTCAGCTCAAAACAATTTGAAGTTTTTGATGTTGAATTATTGAGCATACAAAACTGTGAAAGAAGAACAATAGGCTTTTATTCTGATGTTGTATGCAATTGA 765 0.3869 MLLLLSSPPSSPSLMLSLPLKFLCAVQGQGESTHACTNKKQKDYIVQDSSILHPENVLRRKLVLSALVTAFVFPTLSSNAKTKNMNPYNEKRVLQQNRNIQKQNNAPDDFPNFIREGFEVKVIAPDDYIKRDSGLIYRDFEVGTGDCPKDGQQVTFHYVGYNESGRRIDSTYLQGSPAKIRMGNKALVPGFEEGIRDMKAGGKRRIIIPPDLGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIGFYSDVVCN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00058 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 13 254 IPR044239 -
Vifa4g00058 254 SUPERFAMILY FKBP-like 71 238 - -
Vifa4g00058 254 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 148 213 IPR001179 GO:0003755
Vifa4g00058 254 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 151 238 IPR001179 GO:0003755
Vifa4g00058 254 Gene3D - 83 244 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00058 Vifa-Chr4 7114497 7117594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00058 146 240 Calmodulin-binding Proteins AT5G48570 32.990 1.36e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00058 - - cam:101493728 427.172